Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc11g00024 ATGGCGGTTTCACTTTCACCCATCATGTTGCTCATCTTGATCATCATGATCATTCCATATGGATCATCGTTATCATTCAACTTCACCAGCTTTGATCCCAATAACAAGGCCATAGTCTATGAGGGATCAGCATCACCAGTGTCACCATCAATCCAGCTCACCACAAACCAGCAAGACAAGCCCATGAATGACAGCATTGGTCGTGCCACTTACTACCAACCCATGCACCTCTGGGACAAAGCTTCAAGGAACCTCACTCACTTTACAACCCACTTCTCCTTCATCATTGATTCTCAGAACCGAACAAACTATGGAGACGGCCTTGCATTCTTTCTTGCTCCTAACGGTTCCACGCTCCCCAACGCCACCCAAGGACGCTCCTTGGGTCTCACAGTTGACAACCTTAATCAGACACTCAACTCAACCGAAAACCCCTTTGTTGCTGTGGAGCTTGATATCTTCTCAAATCGTGGATGGGATCCACCAACAGAACATGTCGGTATTGACATCAACTCAATGAGGTCTGCTTATAATGTCACATGGCTCACTGCTGCTGACATCAAGGAAGGGAAGCTCAATGAGGCTTGGATCACTTACAATGCTACTTCACTCAATTTGAGTGTCACCTTCACTGGCTCCATCAATGGCACAACCCTCTTGAAGCAACATCTATTTGCCATAGTGGACTTGAGAACTTATTTGCCGGAATGGGTTACCTTTGGATTCTCGGCTGCCACAGGACGTTTCTATGCTATTCATAGTGTCTATTCATGGGATTTTAGCTCAACCTTGGAAGAACAAGCTCAGCAAAACCCACTTGGAAGTTCTCCAAGTCAGAAGAAAAAGTCTAACAATACAGGACTAGCAGTTGGATTGGGAATCGGTGGAGCAGTTTTGTTTGCTGTGTTGGGTTTGGTTTTGGTTGGATTGTGGAACAAATGGAATAAAGGAACTGATGATGAGGAAGATGATCAAGATTTTGAGGAGCATATGGGGGAGGATTTTGGAAGGGGAACTGGGCCTAAGAAGTATTCATATGCTGAATTAGCACATGCAGCTGATAATTTCAAAGATGAGAACAAGCTTGGTCAGGGTGGCTTTGGTGGTGTCTATAGAGGGTATCTCAAAGATATCAACTCCTATGTTGCTATCAAGAGGATTTCAGAACATTCTACTCAAGGAATAAAGGAATTCGCATCTGAAGTGAAGATCATTAGCCGGCTAAGGCATCGAAATCTTGTGCAACTAATTGGTTGGTGTCCCAAAAGAAAGAAGCTCTTGCTTGTATATGAGTACATGCCTAATGGAAGCTTAGATTTTCATCTTTTCAAGGAGCAGAATTTGCTCAAGTGGGCAGTGAGATACAATATAGCTCGAGGCTTGGCGTCCGCGCTGCTATACTTGCAAGAAGAATGTGAACAATGTGTTGTGCATAGGGATATCAAATCGAGCAACGTGATGCTGGATTCAGAGTTCAATGCCAAACTTGGAGATTTTGGACTAGCAAGGCTTGTGGATCACGCTAAAGGCGCGCAAACCACGGTGCTAGCAGGTACTCGAGGCTACATGGCTCCCGAATGCAATACCACATGGAGGGCCACTAAGGAATCAGACGTGTATAGTTTTGGAGTTGTTGCATTAGAGATAGCATGTGGAAGAAAAGCCATCAAGTATGAGGCCCCAGAAAATGAAATCAGTATTGTGGAATGGGTTTGGGGACTTTATGGAAGAGGGGAAATCCTTGAAGCAGCAGATGGAAGGCTTGATGGGGATTTTGAAGAGGAAGAAATGAAATGCTTGATGGTTGTTGGGCTATGGTGTGCTCACCCAGATCACAAAAGTAGGCCTTCAATGAGGCAAGCAATTCAAGTGCTTAACTTCGAAGCTCCATTACCCACTCTTCCATTGAGTTTGCCTATCCCTACCTATGTTAACTCGTCTTCTATTATAGCTCCATTCAGCATAGATCATTCTTCAGGGGATGTCCAATACCATACCATAAGTTCTACCTCAAACTCAAACACAAACACAAACTCCTCCGGTATCACCTCAACTTCTGATGATGTATCTCCCTCTAAGTCACTTCTGCACTCGCAGTAA 2100 0.4443 MAVSLSPIMLLILIIMIIPYGSSLSFNFTSFDPNNKAIVYEGSASPVSPSIQLTTNQQDKPMNDSIGRATYYQPMHLWDKASRNLTHFTTHFSFIIDSQNRTNYGDGLAFFLAPNGSTLPNATQGRSLGLTVDNLNQTLNSTENPFVAVELDIFSNRGWDPPTEHVGIDINSMRSAYNVTWLTAADIKEGKLNEAWITYNATSLNLSVTFTGSINGTTLLKQHLFAIVDLRTYLPEWVTFGFSAATGRFYAIHSVYSWDFSSTLEEQAQQNPLGSSPSQKKKSNNTGLAVGLGIGGAVLFAVLGLVLVGLWNKWNKGTDDEEDDQDFEEHMGEDFGRGTGPKKYSYAELAHAADNFKDENKLGQGGFGGVYRGYLKDINSYVAIKRISEHSTQGIKEFASEVKIISRLRHRNLVQLIGWCPKRKKLLLVYEYMPNGSLDFHLFKEQNLLKWAVRYNIARGLASALLYLQEECEQCVVHRDIKSSNVMLDSEFNAKLGDFGLARLVDHAKGAQTTVLAGTRGYMAPECNTTWRATKESDVYSFGVVALEIACGRKAIKYEAPENEISIVEWVWGLYGRGEILEAADGRLDGDFEEEEMKCLMVVGLWCAHPDHKSRPSMRQAIQVLNFEAPLPTLPLSLPIPTYVNSSSIIAPFSIDHSSGDVQYHTISSTSNSNTNTNSSGITSTSDDVSPSKSLLHSQ 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc11g00024 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 267 IPR013320 -
Stsc11g00024 699 FunFam L-type lectin-domain containing receptor kinase IX.1 22 272 - -
Stsc11g00024 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Stsc11g00024 699 Gene3D Transferase(Phosphotransferase) domain 1 433 645 - -
Stsc11g00024 699 MobiDBLite consensus disorder prediction 666 699 - -
Stsc11g00024 699 Pfam Protein kinase domain 356 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00024 699 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Stsc11g00024 699 Gene3D - 22 274 - -
Stsc11g00024 699 CDD STKc_IRAK 362 626 - -
Stsc11g00024 699 SUPERFAMILY Protein kinase-like (PK-like) 340 658 IPR011009 -
Stsc11g00024 699 PANTHER - 53 635 - -
Stsc11g00024 699 Pfam Legume lectin domain 23 270 IPR001220 GO:0030246
Stsc11g00024 699 FunFam L-type lectin-domain containing receptor kinase IX.1 341 432 - -
Stsc11g00024 699 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00024 699 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00024 699 FunFam Lectin-domain containing receptor kinase A4.3 433 645 - -
Stsc11g00024 699 CDD lectin_legume_LecRK_Arcelin_ConA 24 264 IPR001220 GO:0030246
Stsc11g00024 699 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Stsc11g00024 699 Gene3D Phosphorylase Kinase; domain 1 341 432 - -
Stsc11g00024 699 MobiDBLite consensus disorder prediction 319 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc11g00024 Stsc-Chr11 128444 130585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc11g00024 9 643 Receptor kinase-like Gene Family AT5G10530 46.417 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc11g00024 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc11g00024 - - gmx:100817743 930.243