Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc11g00022 ATGGCTGATTGTGATTTCAATTGCATTATTGCATTGCTGCTTATCATTATAATAACAATCCCTCTAATAACTGCAAATTCTGAGACTCTATTTTCTTTTCACTGCAACTGCTTCAACCATGGTCATTGTAATGATCTAGCCCTGGAAGGTAATGCAACTCACTCACAACCTTTGAACACTATCCAACTTGCAGGAAGCAAAATCAATGCTTCAGGATTTGGAAGAGTCACAACAAGGCAAGAACATCTTAAGGTAAATGGTTCAAGATATGACTTCACCACAAACTTCTCCTTTCTTGTTTTCACAGATGACCCAACCTACACTGGAGATGGCTTGGCATTCTACATAGCAAGCCCCAAACTTCCAATCCAAGACGGAATAGACGGGGGAGGCCTCGGCCTTGTCAAGTCTTTCCACCATCTCCCACATGAATTCTCTTTTGTGGCTGTGGAGTTTGACACATACCCAAATGGATGGGATCCAGCTGGTCCATACCCTCATATAGGACTTGATCTCAATTCTGTTGTTTCCAGCCTCACTCAGATATTGTATGTAGATTTCACACAGAGAGAGCAAGTTTTCAATTTTAGTATTCAGTATAATTCTGGAAACAAGCGTCTAGATGTTTTCTTCACCGCAGACACCTCCAATGAGCCTGGAAATGGAAGGAGGCATTTTTCGTTTCCCTTGGATCTTGATGAGTTCATAGATGATCCTGTTACAATTGGCATATCAGCTGCAGTTGCAGAAAAAAATAATACTGTCAGATATAGCTTGCTGTCATGGTCATTCACTGCAACTTTACATGTTCCGAGTAATGCTGCTGATTCCTTTCCCCACAAGGCACATTTGGTGAAAGCACTGGAAATGGTGATTGGTTTGTCTGTGTGTTTATTTGTTTTGGTCTTAGTCCTGCTCCTGATTTTGATACGAAGGAGAGGGAAAAGCGAGTGTGAGTCGCCGTTTGATCCGATGGATTATGAATTCCAAACTGGCACTGGACCACAGAGGATCAGCTATGAGAGATTGGTGTCCGCCACGGATAACTTCCAAGAGGCGAAGAAGCTTGGAAAAGGAGGCTTTGGTGGTGTTTATAAAGGATACTTCAAAGATACAGACTCTTATGCTGCTGTAAAGAAGATATCAGCAGATTCAAAGCAGGGGTTAAAGGAATATGCAGCTGAAGTGAAGATCATTAGCCAATTGAGACACAGGAATTTGGTTAGACTTACTGGTTGGTGTCACAAGAAGAATGAATTCATTCTGATATATGAGTATATGCCGAATGGAAGTTTGGATTCTTGCCTTTTTGAAGGAGTAGGCTTCTTGTCTTGGCAAGTAAGGACCACAGTAACTGCTGGCACACTTGGTTACATAGCACCAGAATACATGAAAACAGGAAAAGTTGGAAAGGAATCTGACATATACAGTTTTGGGGTGGTTTTGTTGGAGATAGCAAGTGGGAAAAAGGTTATACACCACAGAGAAATGGAAGGTCGTGTGACTCAAGTTTCATTGGTAGAGTGGGTTTGGGAGCTCTATGGTTTGAGAAATGTCCTAGCAGCAGCAGATTCAAGTCTATGTAGGGATTTTGATGTTCAGCAAATGGAATGTATTCTTGTTGTTGGGCTTTGGTGTGCTCATCCAGATTGCACATGCAGGCCCTCTATAAGGCAAGTGATAAAAGTTCTTAATTTTGATGCTCCTTTACCAATTCTTCCACAAAGGATGCCTCTTTTACCCTATCTCCCCTCAATAACAAATGAAGTCTTTTTAACTGCTGTTTCTTCGTTTTAG 1797 0.4151 MADCDFNCIIALLLIIIITIPLITANSETLFSFHCNCFNHGHCNDLALEGNATHSQPLNTIQLAGSKINASGFGRVTTRQEHLKVNGSRYDFTTNFSFLVFTDDPTYTGDGLAFYIASPKLPIQDGIDGGGLGLVKSFHHLPHEFSFVAVEFDTYPNGWDPAGPYPHIGLDLNSVVSSLTQILYVDFTQREQVFNFSIQYNSGNKRLDVFFTADTSNEPGNGRRHFSFPLDLDEFIDDPVTIGISAAVAEKNNTVRYSLLSWSFTATLHVPSNAADSFPHKAHLVKALEMVIGLSVCLFVLVLVLLLILIRRRGKSECESPFDPMDYEFQTGTGPQRISYERLVSATDNFQEAKKLGKGGFGGVYKGYFKDTDSYAAVKKISADSKQGLKEYAAEVKIISQLRHRNLVRLTGWCHKKNEFILIYEYMPNGSLDSCLFEGVGFLSWQVRTTVTAGTLGYIAPEYMKTGKVGKESDIYSFGVVLLEIASGKKVIHHREMEGRVTQVSLVEWVWELYGLRNVLAAADSSLCRDFDVQQMECILVVGLWCAHPDCTCRPSIRQVIKVLNFDAPLPILPQRMPLLPYLPSITNEVFLTAVSSF 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc11g00022 598 PANTHER - 50 451 - -
Stsc11g00022 598 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 274 IPR013320 -
Stsc11g00022 598 FunFam L-type lectin-domain containing receptor kinase IX.1 335 426 - -
Stsc11g00022 598 Gene3D Transferase(Phosphotransferase) domain 1 444 580 - -
Stsc11g00022 598 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Stsc11g00022 598 Pfam Protein kinase domain 448 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00022 598 Pfam Protein kinase domain 350 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc11g00022 598 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Stsc11g00022 598 FunFam Lectin-domain containing receptor kinase A4.3 446 584 - -
Stsc11g00022 598 Gene3D - 29 286 - -
Stsc11g00022 598 ProSitePatterns Protein kinases ATP-binding region signature. 356 380 IPR017441 GO:0005524
Stsc11g00022 598 Pfam Legume lectin domain 32 271 IPR001220 GO:0030246
Stsc11g00022 598 SUPERFAMILY Protein kinase-like (PK-like) 334 585 IPR011009 -
Stsc11g00022 598 ProSiteProfiles Protein kinase domain profile. 350 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc11g00022 Stsc-Chr11 121596 123561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc11g00022 91 582 Receptor kinase-like Gene Family AT5G10530 37.589 8.59e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc11g00022 Lectin_legB 1.2e-38 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc11g00022 - - cam:101492002 401.364