Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc119g00010 ATGGAACTGGTGGACAAAGTAGTTGTTTATCCTGAGCAACCCAGTCTCAACAATAAGCGAATTTTCTTGTCAAATATTGACTTATCCCTTGTTGTTTATCAAGACACTGTCTCCTTCTTTGATCCTCCAAGTAGTGAAATAAGTTTCTCTGAAATTTATAACAAATTGTGCAAAGCATTTAGTAAATTGCTTGTACCTTATGACTTTATGGCCGGAAGACTTGTGCAAAGTTTGGAGGATAGTAATCGCTTTGAAATAGAATGTAATGATGCTGGTATTGTGGTTATTGCTGCAAGAACCGATAGAAAGTTGAGTGGATTTGTTGTTTTTGCGCCTAGTCAAGATTTAGAGGAATTGGCTATGTTCTTAAGAGAGGGGGAAGAAGAAATTGACTTAAAAAAGAAACCTCTTTTATCCGTACAACTGACGCAATTTGGATGTGGAAGTTTGGCACTAACTACTCACTACAACCATTGCACACTAGACGGTTTAGCAGTAAGAGATTTTGAGGCAAACTTAGCCGCATTAACACGTTCTGAGCCCTTAATTGTAGTTCCTATTTCAGACAGAACTTTGCTAAGAGCAAGAAACCCACCAAAGATAAGCCATCCACATTATGAGTATGCAAAAGCTACTAACACTGAAAATTTGTTTAGTGTCCATGGCACAAGCAATGCTTTGGTTCCAGGATTTGCAAGAGCTACTGTGAAGGAACTGATGGAATCAGAGCATGGTTATGGTATCAAAAAAGTTCAAGAAGGAATTGAAAGGTTGGATGATGAGTATATTAAGTCAGGTATAGATTGGTTAGAATTAAATAAAGGAATGCCTTATTGGGAAGATAGTTTCTCATTAGTTTCATGGTTGAAATTGGGACTTGAGGATCAAACTTTTGCATGGGGTCAACTAAAATGTTCTACACCGCTTACAGTTAAGCCATGTTTAATCATTCTGTTACCGGGGCCACCAGGTGATGGAGGTATCAATATCTCTCTAGATTTGCCTCAAGATCAAATGTACGTGTTTAGTAGGATAATGCTGGAAGAATTCTAA 1053 0.378 MELVDKVVVYPEQPSLNNKRIFLSNIDLSLVVYQDTVSFFDPPSSEISFSEIYNKLCKAFSKLLVPYDFMAGRLVQSLEDSNRFEIECNDAGIVVIAARTDRKLSGFVVFAPSQDLEELAMFLREGEEEIDLKKKPLLSVQLTQFGCGSLALTTHYNHCTLDGLAVRDFEANLAALTRSEPLIVVPISDRTLLRARNPPKISHPHYEYAKATNTENLFSVHGTSNALVPGFARATVKELMESEHGYGIKKVQEGIERLDDEYIKSGIDWLELNKGMPYWEDSFSLVSWLKLGLEDQTFAWGQLKCSTPLTVKPCLIILLPGPPGDGGINISLDLPQDQMYVFSRIMLEEF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc119g00010 350 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 225 342 - -
Stsc119g00010 350 Pfam Transferase family 225 343 - -
Stsc119g00010 350 Pfam Transferase family 2 213 - -
Stsc119g00010 350 Gene3D - 218 347 IPR023213 -
Stsc119g00010 350 Gene3D - 1 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc119g00010 Stsc-Chr119 96856 99839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc119g00010 234 348 Monolignol Biosynthesis Gene Families AT5G48930 24.194 1.26e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc119g00010 K15400 - qsa:O6P43_016872 409.068