Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1184g00002 ATGGATATGCCAAATATGCCAAATATGACTGATAATGGCACCAACATGGACATGAATATGCAGATGAGCTTCTATTGGGGGGAACATGGCACAGTGCTTTTCTCTGGCTGGCCAAACCACAGAGCTGGCATGTACACATTGGCACTCTTCTTTGTTTTCTTCTTATCACTGGGCATTGAGATTCTCTCCAACCAGCCCCCGATTCGCCACGGGGCTAAACCGGCTCTCGGTGTGGTGGTTCAGGCCGTTGTGTACTTCTTCCGGATCAGCTTCCTCTACTTGGTCATGCTTGCTGTCATGTCCTTCAATGGAGGAATCTTCATAGCTGCTGTTCTTGGTCACTCCTTGGGATTCTTCTTAGCCAAGTTCCGAGCTATCTCCATGGCCAATAGGGAATCCTCTGGTCTTGAACAAAAGGTTTGA 423 0.4823 MDMPNMPNMTDNGTNMDMNMQMSFYWGEHGTVLFSGWPNHRAGMYTLALFFVFFLSLGIEILSNQPPIRHGAKPALGVVVQAVVYFFRISFLYLVMLAVMSFNGGIFIAAVLGHSLGFFLAKFRAISMANRESSGLEQKV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1184g00002 140 Pfam Ctr copper transporter family 22 63 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc1184g00002 140 Pfam Ctr copper transporter family 74 120 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc1184g00002 140 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 13 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1184g00002 Stsc-Chr1184 13793 14603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1184g00002 23 120 Inorganic Solute Cotransporters AT5G59030 49.020 2.74e-26 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1184g00002 K14686 - gmx:100527849 161.384