Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1184g00001 TCTTACACAAAATTTCTTAAACCACTTGTTATAAGTAACATAAAATTCATAGCTACTACATATACACTTCAAATGGCATCAATCGCAGCGGCAGAGGGCGTGCCGGCACCGTATAACTCGACGGTGGCGACTCGGCTAGGCCGGAGAAGAATTCCGATCCACACGACGTTCTATTGGGACCACAAGGTAGACATACTTTTCCGGTGCTGGCCGGGGGACAGCGTGGGCATGTACGTGGTGGCGCTGATGCTGGTGTTCACGATGGCGGTGCTGGTGGAGTGGCTTTCCTTCACCAAGATAGTGAAGCTGAAGCCAGGGGGCTCAAACGACATCGTTGGGGGACTGTTGAAGACGGGGCTATACGGCGTTCGTTCGGGTCTCTCTTACTTGGTGATGCTGGCCGTTATGTCGTTTAACGGAGGGGTTTTTATTGTCGCAATTGGCGGCCACGTCATCGGGTTCTTGATTTTCGGTACTCGAGCGTTTAGGACGCCTCTACCGGATTCTTCTAATAATAAGCCTTTGGATTTGCGAGTTCGGTAG 543 0.512 SYTKFLKPLVISNIKFIATTYTLQMASIAAAEGVPAPYNSTVATRLGRRRIPIHTTFYWDHKVDILFRCWPGDSVGMYVVALMLVFTMAVLVEWLSFTKIVKLKPGGSNDIVGGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFIVAIGGHVIGFLIFGTRAFRTPLPDSSNNKPLDLRVR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1184g00001 180 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 53 164 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc1184g00001 180 Pfam Ctr copper transporter family 56 99 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc1184g00001 180 Pfam Ctr copper transporter family 115 157 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1184g00001 Stsc-Chr1184 2166 2789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1184g00001 56 172 Inorganic Solute Cotransporters AT5G59030 47.863 2.49e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1184g00001 K14686 - gmx:100803410 251.906