Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc117g00013 ATGGCTTCCCACTTGCACAACCCTATGCCACTTCCTCCCATCAACGACCTCACCTGCATTGTCACCGGATCCACCAGCGGCATTGGCCGTGAAATCGCTAGGCAATTGGCACAAGCAGGGGCTCATGTTGTTATGGCTGTTAGGAACACAAAGGCAGCTCAAGAGTTGATACAGCAGTGGCAGATCGACTCTGAAGGGTTTGGTATTGCTCTCAGTGTTGAGATAACATTTGAGTTGATAGTGAAGCAGCTTATGAGCTTTGATCCAGGATTCTTCACTCTCCCTTTACCTCTCTTCTCTACCACTTACCGCAGAGCCATCAAGGCAAGAAGGAAGGTGGCAGAGGCAGTAACAATTGATTGTGAGGGAGAGGAGAAAAGAAAGCGAAACAGAGGAGGAAAAAAAGAATGA 411 0.4818 MASHLHNPMPLPPINDLTCIVTGSTSGIGREIARQLAQAGAHVVMAVRNTKAAQELIQQWQIDSEGFGIALSVEITFELIVKQLMSFDPGFFTLPLPLFSTTYRRAIKARRKVAEAVTIDCEGEEKRKRNRGGKKE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc117g00013 136 Pfam short chain dehydrogenase 19 71 IPR002347 -
Stsc117g00013 136 PANTHER RETINOL DEHYDROGENASE 13 61 - -
Stsc117g00013 136 Gene3D - 6 119 - -
Stsc117g00013 136 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 60 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc117g00013 Stsc-Chr117 80891 82777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc117g00013 74 119 Cytochrome P450 AT5G05690 62.903 1.01e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc117g00013 - - gmx:100782533 137.117