Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1174g00001 TTGAGGCGCAAGAAAGTTTTCATTGTACTTGATGATGTGAACACTTCTGAACTTCTAGAAAATCTGCTTGGAGTGGGACAAGATTATCTCGGAGTTGGTAGCAAAGTTATTGTTACAACTCGAGATAAGCATGTTCTTCTGAGTAGATCAGTTGATCATATTCATGAAGTTATGGAAATGAATGATGAGAACTCTCTCAAACTCTTTAGCTTCAATGCCTTCAATAAAACACACCCTCCTGAAAATGAATACTGGGATCTATCAAAAAGGGCACTTGCTTATGCCAGAGGAAATCCTTTAGCTTTGAAAGTTTTGGGATCATTTCTCCATTCCAAAAGTGAAAAGGAATGGGATAATGCACTAACAAAACTAAAATGGATCCCTAATGCAGATATTCAGAAGGTGTTGAGGTTGAGTTTCAATGAATTAGATGACACAGAGAAGGATATATTCTTAGACATTGCATGCTTTTTCAAAGGAGAAGAGAGAGAAAAAGTAGCTAGGATATTAAATGAGTGTGGCTTCTATGCAGATATTGGAATAAGAAATCTTTTAGACAAGGCTCTTATATCAATATCTACCAATAAAAGCATACAGATGCATGACTTGATCCAGGAAATGGGTCATAAAATTGTGTGCGAAGAATCTCCCAAGAACCCTGGAAAGCGAAGCAGAGTATGGCATCCAGATGAAATATGCGAGATATTAAAAAATGATATGGGGTCCGCTACGATTGAAACCATATATTTAGATATGACTCGGCGGGCAGAAATATGTATAAGCTCCAATGCACTAAAAAAGATGCCAAAGCTAAGGTTACTTGCTTTTGATAGCGGCGATATGGATTATGGGAGAAAGAGAGTTGATTATACTTTGAGTCTTCCAACAAATCTGGAGTTGCCTAACAATTTGAGATACATCCAATGGGAAGGATGTCCATTAAAATCTCTGTCAACCACTTCTTGGCCAAGCAAGCTTGTTGAACTTTCCATGCCATATAGTGATGTTGAAAAGCTTTGGGATGGGGCCCAGGATTTTCCAAGTTTGGAGGAAATTCATCTGTCTTATTCAAAACAACTGATAGAGTGTCCAGATTTATCTGGTGCCCCAAATCTGAGACAAGTGTGGGTAAATGGTTGTGACAAATTAGTTCATCTTCACCCTTCTATTTTGTCTCGTCCAAAGCTTGAAGGGTTAGCTGTGTATGGATGCACAGAACTTAAGAGCCTTTCTTGTACCACTTGTTCACCATTTCTTAAACATGTTGTTGCTTATAATTGCCCAAATATGCAAGAATTCTCAATCCCAATTTCAAAAGATACTATTGATATTAATCTGCATTTGAGGTCAACTCCCTTAAAGCAACTACCTTCATCAATTATGCTTCTTAGAAATCTTTCAAACTTCTCCTTTCCAATCAGTGATATCCTGATGGATCTTCCTGAAAGGTTCACCAATCAAATCATTCTTTCAAACCCAAATGATCATGAATGTGACCCAGTGGCCACCTTACGCACAATAATACCCAGCCCTGTGTTCCATTATATAAGAGAACTGAAATTTGATGGATGTCCAGGTTTAACTGAACTTCCAGACAACATCTCTTTGTTATCAACAGTGATTTTGATAACCATACATAAAATTAATATCATGACCTTTCCAGAAAGCATTAAGGCTCTTCCGCGGCTCAAAGTTCTTTTTATTTGTCATTGTGAAAGGTTACAATCTGTACCAATGCTTCCACCATCCCTTGAAGCTTTTAAGGTATGGGATTGCAAATCTTTAAGGACAGTGTCAAGTTCAACAGAACAACTAAAAAGACAGTACGATGCTGCTTTTGTATTCCTAAACTGCGTGCAGTTAGATGAAGAGTCATACTTTACCATGTTGAAGGATGCCATTGTTAGGGCTGAAGGAAAACAACTTTCACCAAGATCAGAAAAAATCAGGAATGGAGAATGCACTGATTTTGATTATGATGAAGCTTTCCTTATTCAGCATAACATCAATGTTGGCAAGATAATGGAAATAGTCAGCGGAAGAAGAAAGGCTATTGATGATGATGATAACAATGCAAATATGACAGTTAAGTTCTTTGCTCACCTATCAAATAAGGAGGAAGTGGCAATAAAAGCTTGTGGCATCCGTTGGATGTACCCAAATATGGAGGAGGAATCAAGAGGGCGTAGATTCAAGAGAAGAAGGGAAGAATTCGAGTTAGATGAGTTAGAAGCCATTGCATCTCGAAATAAAGAAAAGGGCTTGGATTCTGACGATGGTGAAGAACTAGTTCCTCCAACAAAGAAATTTAAGCATGGTTTCTTTGAAGCTCCCTCAATCCTTCAAGTTGAATCATTAGAAGACTTGAGGAAAAAACTTCAACAAGTTTTGCACATTCAATTTGATGATGGAGACTCATGCAGTGCAGACTTCAAATTGGGCTACAATGTGTAG 2454 0.3786 LRRKKVFIVLDDVNTSELLENLLGVGQDYLGVGSKVIVTTRDKHVLLSRSVDHIHEVMEMNDENSLKLFSFNAFNKTHPPENEYWDLSKRALAYARGNPLALKVLGSFLHSKSEKEWDNALTKLKWIPNADIQKVLRLSFNELDDTEKDIFLDIACFFKGEEREKVARILNECGFYADIGIRNLLDKALISISTNKSIQMHDLIQEMGHKIVCEESPKNPGKRSRVWHPDEICEILKNDMGSATIETIYLDMTRRAEICISSNALKKMPKLRLLAFDSGDMDYGRKRVDYTLSLPTNLELPNNLRYIQWEGCPLKSLSTTSWPSKLVELSMPYSDVEKLWDGAQDFPSLEEIHLSYSKQLIECPDLSGAPNLRQVWVNGCDKLVHLHPSILSRPKLEGLAVYGCTELKSLSCTTCSPFLKHVVAYNCPNMQEFSIPISKDTIDINLHLRSTPLKQLPSSIMLLRNLSNFSFPISDILMDLPERFTNQIILSNPNDHECDPVATLRTIIPSPVFHYIRELKFDGCPGLTELPDNISLLSTVILITIHKINIMTFPESIKALPRLKVLFICHCERLQSVPMLPPSLEAFKVWDCKSLRTVSSSTEQLKRQYDAAFVFLNCVQLDEESYFTMLKDAIVRAEGKQLSPRSEKIRNGECTDFDYDEAFLIQHNINVGKIMEIVSGRRKAIDDDDNNANMTVKFFAHLSNKEEVAIKACGIRWMYPNMEEESRGRRFKRRREEFELDELEAIASRNKEKGLDSDDGEELVPPTKKFKHGFFEAPSILQVESLEDLRKKLQQVLHIQFDDGDSCSADFKLGYNV 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1174g00001 817 Gene3D - 1 55 IPR027417 -
Stsc1174g00001 817 Pfam NB-ARC domain 1 126 IPR002182 GO:0043531
Stsc1174g00001 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 154 IPR027417 -
Stsc1174g00001 817 Gene3D - 59 144 IPR042197 -
Stsc1174g00001 817 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 590 IPR044974 GO:0006952
Stsc1174g00001 817 SUPERFAMILY L domain-like 247 601 - -
Stsc1174g00001 817 SUPERFAMILY "Winged helix" DNA-binding domain 131 237 IPR036390 -
Stsc1174g00001 817 Gene3D Ribonuclease Inhibitor 244 440 IPR032675 -
Stsc1174g00001 817 Gene3D Ribonuclease Inhibitor 444 608 IPR032675 -
Stsc1174g00001 817 Pfam Leucine Rich Repeat 325 344 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1174g00001 Stsc-Chr1174 17 3391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1174g00001 1 649 WRKY Transcription Factor Family AT5G45050 31.595 1.39e-71 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1174g00001 - - adu:107464298 1103.2