Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc116g00011 ATGCCCTCCCGTCCACCACCACTCCCCCAACAACAACCACTCTCCACGGCAGCACCACCTCTCCACCACACCCACCACCACCGCCACCAAATCATCCTCATCGGATCCCTCTCCCTCTCCATCCTCCTCCTCCTCTCTCTCCTCTTCACCCTCCTCACCTTCCTCTACCGCAAACTCTCCCTCCACCGCACCACCCCTTTCCCCCACCACCACCACCACCACCACAACAACAACACCACCAACCACCGCCGCTACTCCTACGCCCTCCTCCGCCGCGCAACAAACTCCTTCTCCCCGTCCACCAAACTCGGCCACGGTGGCTTCGGCTCCGTCCACAAAGCCACCCTCCCTTCCGGCGAAACCGTCGCGCTGAAACTCATGGACTCTCCGGGCTCCCTCCAAGGCGAACGAGAGTTCCACAACGAACTCTCTCTGTGTTCGAATCTCAACTCGCCTTTCATTCTCTCTCTCTTGGGATTCTCTTCCGACAGAAGAAACCGCAAGCTCATACTCGTCTACGAGCTCATGAAGAATCGGAGCCTTCAAGACGCGCTCTTGGATCGCAAGTGCCCCGAGCTTATGAGCTGGAAAACGCGCTTCGACGTCGTCGTTTCGGTGGCGAAAGGGTTAGAGTACTTGCACCATTTTTGTGACCCTCCGGTGATTCACGGTGATATCAAACCGAGTAATATTCTGTTAGATTCTGAGTTTAGGGCTAAAATTGGGGATTTTGGGCTTGCTAGGGTGAAGGAGGAGGTTGGTGTTGTGGTGGTGGAGGAGGAAGGTGGTGACGGTGGTGGTGGTGATGAAGAGTGTGATCGTGGTTCGGTGGTGGAGAGTGTGGCGACTGGGACTACTGCTGGGCTTGATTTGGAGAGATCGCCGGAGAGTTTCGCGGCGGTGAGGGTTTTGGATTCAGATGCGTCTCCTCCGGCGGCGGCGGGGACTTCGCCGGAGGTGGGGTTGGAGAAAGGTAGCGTCTTGTCGGATGGGTTGTTTGATGGGGTGAGTGTGGAGAGTGGGAATCAGAGGAGGAAAGGTGGCGGCGGTAATGGCGGTGGTTCCGGCAGGGATTGGTGGTGGAAACAGGACAATGGTGGAGGGTCAGAGTCAGGTAGAGTTAAGGATTATGTTATGGAATGGATTGGTAGTGAGATAAAGAAAGAAAGACCCAAGAATGAATGGGTTGCTTCTCCAAGTAGCATTAGTTGTGATGCAGAGAATAATGTTGATGTTGTTGAAGGATTGGATTCTGAGTCCAAAAACAACAAGAATAAGATTAAGAAGAAGAAGCAGAGAAAGAGGTTGGATTGGTGGGCTTCATTGGATGAGGATAAGGTGAAAAATCAACAGCAGCAGAAGAAGGAGAAGAGCCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGCGAGGAGCTGGCGAAGAAGAGCAAGAAGAAGAAGAGGAGCCTTGATAACAATGGTGGTGAAGCTTGGTGGCAGAACAAAGATGAGGACTTGGTGGTGGCTCAGGATCAGAAGAGGAAGAGGAAAAACAAGAGTAGCAGAGGGAGTATTGATTGGTGGCTTGATGGTTTGAGTGGTGAACTTATCAGAAACAACAATGGCAGAAGGAATAGCCAAGATTGGGTTAGTGGTGACATACCGAAGAGCGGCGGAATCAGCAGCACTCCGAGTATGAGGGGGACAGTGTGTTATATTGCTCCTGAGTATGGTGGTGGTGGCCAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCTGGGAGGAGACCCCTTCAAGTGACGGCGTCGCCGATCTCGGAATTCGAGAGGGCTAATTTGATTTCATGGGCTAGGCAACTTGCTCACAATGGCAGGCTCTTGGATCTGGTTGACACTAACATTCATTCATTGGACAAGGAACAAGCCTTGCTCTGCATCACAATTGCCCTGTTGTGCCTCCAGAGATCGCCCGCAAAGAGGCCGTCCATGAAGGAGATCGTTGGGATGCTCTCCGGCGAGGCCGACACGCCCCACTTGCCTTTCGAATTCTCGCCGTCACCGCCGTCGAATTTTCTCTTCAAGTCAAGGAAGAAGGCTCGGTGA 2109 0.5277 MPSRPPPLPQQQPLSTAAPPLHHTHHHRHQIILIGSLSLSILLLLSLLFTLLTFLYRKLSLHRTTPFPHHHHHHHNNNTTNHRRYSYALLRRATNSFSPSTKLGHGGFGSVHKATLPSGETVALKLMDSPGSLQGEREFHNELSLCSNLNSPFILSLLGFSSDRRNRKLILVYELMKNRSLQDALLDRKCPELMSWKTRFDVVVSVAKGLEYLHHFCDPPVIHGDIKPSNILLDSEFRAKIGDFGLARVKEEVGVVVVEEEGGDGGGGDEECDRGSVVESVATGTTAGLDLERSPESFAAVRVLDSDASPPAAAGTSPEVGLEKGSVLSDGLFDGVSVESGNQRRKGGGGNGGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKNEWVASPSSISCDAENNVDVVEGLDSESKNNKNKIKKKKQRKRLDWWASLDEDKVKNQQQQKKEKSRKPREWWKEEFCEELAKKSKKKKRSLDNNGGEAWWQNKDEDLVVAQDQKRKRKNKSSRGSIDWWLDGLSGELIRNNNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTNIHSLDKEQALLCITIALLCLQRSPAKRPSMKEIVGMLSGEADTPHLPFEFSPSPPSNFLFKSRKKAR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc116g00011 702 MobiDBLite consensus disorder prediction 681 702 - -
Stsc116g00011 702 Gene3D Phosphorylase Kinase; domain 1 68 175 - -
Stsc116g00011 702 SUPERFAMILY Protein kinase-like (PK-like) 71 690 IPR011009 -
Stsc116g00011 702 MobiDBLite consensus disorder prediction 336 372 - -
Stsc116g00011 702 SMART serkin_6 97 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc116g00011 702 Gene3D Transferase(Phosphotransferase) domain 1 533 680 - -
Stsc116g00011 702 Gene3D Transferase(Phosphotransferase) domain 1 176 283 - -
Stsc116g00011 702 ProSiteProfiles Protein kinase domain profile. 97 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc116g00011 702 PANTHER OS07G0586332 PROTEIN 1 702 IPR044576 -
Stsc116g00011 702 MobiDBLite consensus disorder prediction 1 22 - -
Stsc116g00011 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Stsc116g00011 702 FunFam Os07g0541700 protein 176 257 - -
Stsc116g00011 702 Pfam Protein kinase domain 100 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc116g00011 702 Pfam Protein kinase domain 557 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc116g00011 702 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc116g00011 Stsc-Chr116 76547 79133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc116g00011 530 672 Receptor kinase-like Gene Family AT3G58690 34.228 6.18e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Stsc116g00011 Pkinase 1.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc116g00011 - - aip:107626015 1139.41