LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc116g00008	ATGTCCAAATTTGATCCATACAGCCACATTGGAATTGCTTTAAACCCAGATGGCACCCTCACTCGGAACTTAAATTACCCAAAAGTTGATGCAAATCCAGAACCTTCTCCGGGAAGCTCAACCGTCTCAAAAGACATAACCATTAACCAAGAAAACAAAACATGGGTTCGGATCTTCCGACCAACAAAGCTTCCTTCCAATGACAACACCGTTGCAAGGCTACCAATCTTTCTCTTCTTTCACAACGGCGGGTTCATCCACTTTACACCGGCCGACAGCAATCTCCACGGGAACTGCTCGCAAATCGCGAGCGAGATCCCGGCCATAGTTGTCTCGGTTGGATTCCGGCTTGCGCCGGAGAACCGGCTCCCAGCCGCGTACCACGATGGGTGCGACGCCGTTTTGTGGGTGAAGAAGCAAGTGGCTGAGGCTAATGGGGAACAATGGCTAAGGGATTTTGGTGATCCTTCAAGATGTTACCTCTATGGGATTGGATGTGGTGGTAACATTATATTCAACACTGCAATTCTTCTTCCAGAAGAGAATTTGGAGCCTCTAAGAATTGGCGGAATTATCATGAACCAACCAATGTTCAGTGGTGTGAAAAGGACAACCTCAGAGCTTAAGTTTGCAACAGATCAATTGTTACCATTGCCAGTGTTGGACTTGTGTTGGGAACTTGCTCTGCCCAAAGAAACTGACCGTGACCATAGATATTGTAACCCTATGATAAAAGGGCCACACTGGGAAAGTGTTAGGAAGTTGGGTAGGTGTCTTGTTATTGGGTTTGGTGGTGACATTATGGTTGATAAGCAACAAGATTTTGTGACCATGTTGGTTAAATGTGGAGTTCAAGTTGAAGCAAGCTTTGATCAATTAGGGTTCCATAGTATTGATATGGTAGATCCTGTCAGGTTTAGTGCGGTTATGAATATTGTTAAGGAGTTTATCCTTTAA	957	0.4504	MSKFDPYSHIGIALNPDGTLTRNLNYPKVDANPEPSPGSSTVSKDITINQENKTWVRIFRPTKLPSNDNTVARLPIFLFFHNGGFIHFTPADSNLHGNCSQIASEIPAIVVSVGFRLAPENRLPAAYHDGCDAVLWVKKQVAEANGEQWLRDFGDPSRCYLYGIGCGGNIIFNTAILLPEENLEPLRIGGIIMNQPMFSGVKRTTSELKFATDQLLPLPVLDLCWELALPKETDRDHRYCNPMIKGPHWESVRKLGRCLVIGFGGDIMVDKQQDFVTMLVKCGVQVEASFDQLGFHSIDMVDPVRFSAVMNIVKEFIL	318

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc116g00008	318	Gene3D	alpha/beta hydrolase	7	318	IPR029058	-
	Stsc116g00008	318	Pfam	alpha/beta hydrolase fold	78	296	IPR013094	GO:0016787
	Stsc116g00008	318	PANTHER	ARYLACETAMIDE DEACETYLASE	22	297	-	-
	Stsc116g00008	318	SUPERFAMILY	alpha/beta-Hydrolases	31	308	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc116g00008	Stsc-Chr116	62902	64365	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc116g00008	17	302	Carbohydrate Esterase	AT5G16080	31.849	3.37e-37	134

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc116g00008	-		-	gmx:100818565	468.003