Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc113g00007 ATGGCGTTCTGGTGGTCGTTGCTTGTTCTCGCATTTGCTTTCGCCATCGGCAAGTTTCTCCTCTGGCTCATTCCTCCTAAGGTTCCTTCCATTGATGTTGACGCTTCCGATGTGTTGGACGATGGAAATCAAGCGCAGGAGAACAGCTACATATATGTACCTCCAAGGGGAGCGGCACAACAATCTGGCACTAAAGTTCAGTGCTATGAGCCTGCTACCATGAAGTATTTGGGATATGTTCCTGCATTGACCCCAGATGAGGTCAGGGAGCAAGTGGAAAAGGTGCGAAAAGCCCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCCAGTTCTTGCGTATACTTTTGAAGTATATAATAAAACATCAAGCGCTTATATGCGAAATATCTTCACGTGATACTGGAAAGACAATGGTGGATGCCTCTTTGGGAGAAATAATGACAACCTGTGAGAAGATCCATTGGCTACTGTCAGAGGGTGAGAAGTGGCTGAAACCTGAATACAGATCCAGTGGAAGATCAATGCTTCATAAAAGTGCTAGAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCCATTGTGTCATGGAACTATCCTTTCCACAATATTTTCAACCCTATGTTGGCAGCACTTTTTTCTGGAAATGGCATTGTCATCAAGATATCAGAAAACGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCCATAGGTGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTATCTTCTGCTGATAAAGTCATTTTTGTTGGATCACCTGGTGTTGGCAAGATGATAATGAGAGGGGCTTCTGAAACACTTATACCTGTTACACTAGAGCTTGGCGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTGCCAGGGCTGTTCTTCAATCAAGTGGGCAGAACTGTGCTGGAGCTGAACGTTTTTATGTCCACAGGAGCATATATTCATCTTTTATCAGTAAAGTTACCCAAATCATAAAATCTGTTACAGCTGGTCCACCACTTGCTGGAAAGTATGACATGGGAGCTCTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTGTCAATGAAGCTATAGATAAAGGTGCTGAAATTGTTGCAAGAGGAAGTTTTGGGCCCATCGGTGGCGATGCAGTTGATCAGTATTACCCCCCAACTGTGATTGTTAATGTGAATCACTCCATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTCAGCTCTGACGAAGAGGTTGTCAAGCTTGCAAATGACTCAAGATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCCAGAGAGATAGCTTCACAGATACATTGTGGCTTTGCCGCCATTAATGATTTTGCAGTAACATATATGTGTCAGTCCCTCCCATTTGGGGGCGTCAAACACAGTGGATTTGGACGATTTGGTGGTGCAGAAGGTTTGCGAGCATGCTGCCTTGTAAAAGCTGTTGTTGAAGATAGATGGTGGCCATACATAAAAACCATGATACCTAAGCCTATTCAGTATCCTGTAGCAGGAAATGCCTTCGAATTTCAGGAGTCACTAGTTGAAGCACTATATGGTCTCAGCATATGGGACCGTTTGAAAGCATTGATAAGCGTTTTAAAATTGCTTACTGAGCAGAACTCTACCAACAGCGGTAAGGTGAAATGA 1785 0.4398 MAFWWSLLVLAFAFAIGKFLLWLIPPKVPSIDVDASDVLDDGNQAQENSYIYVPPRGAAQQSGTKVQCYEPATMKYLGYVPALTPDEVREQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKIHWLLSEGEKWLKPEYRSSGRSMLHKSARVEFHPLGVIGAIVSWNYPFHNIFNPMLAALFSGNGIVIKISENASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSADKVIFVGSPGVGKMIMRGASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAARAVLQSSGQNCAGAERFYVHRSIYSSFISKVTQIIKSVTAGPPLAGKYDMGALCMHEHSEKLEGLVNEAIDKGAEIVARGSFGPIGGDAVDQYYPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSRYGLGCAVFSGSQSRAREIASQIHCGFAAINDFAVTYMCQSLPFGGVKHSGFGRFGGAEGLRACCLVKAVVEDRWWPYIKTMIPKPIQYPVAGNAFEFQESLVEALYGLSIWDRLKALISVLKLLTEQNSTNSGKVK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc113g00007 594 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Stsc113g00007 594 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 527 - -
Stsc113g00007 594 FunFam aldehyde dehydrogenase 22A1 65 320 - -
Stsc113g00007 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Stsc113g00007 594 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Stsc113g00007 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Stsc113g00007 594 CDD ALDH_F15-22 69 531 - -
Stsc113g00007 594 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Stsc113g00007 594 FunFam Aldehyde dehydrogenase A 301 495 - -
Stsc113g00007 594 SUPERFAMILY ALDH-like 60 532 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc113g00007 Stsc-Chr113 26233 32890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc113g00007 1 590 Aldehyde Dehydrogenase Gene Family AT3G66658 78.983 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc113g00007 - - gmx:100816920 1081.63