Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1130g00002 ATGGAATTTGCTCCTGCCTTCTTGCTCATACTCTTTTTCACTATACCTCTCTTCATAATCAAACTCTTCAAACACAATTATTCACCCAAGAAATCAAAGCAGCCCAGGCTCCCACCAGGTCCCAATCCATGGCCTATAGTTGGTAATCTCCCTGAAATGCTTGTTAACAAACCCGTATTCAGATGGATACAAAACATCATGAATGATCTCAACACCGAAATCGCATGCATCCGTCTAGGCAACATTCATGTCATCCCGGTGACAAGTCCATCAATTGCACATGAATTTTTAGTGAAACAAGATGCGATTTTCGCATCAAGGCCGTTGAATTGGTCCAGTAAATATGTCTCGTCAGGTTTCTTAACCATATCTCTAACACCCTTTGGAGAACAATGGAAGAAAATGAAGAGAATCATGGTTGAGGAATTGCTTTCGCCTAAAAGGCATCAATGGATGCATGACAGAAGGGTGGAAGAATCTGACAACCTTGTCCGCTATGTGTATAACCAAATCAAGAATGGTAGTGGCCTTGTGGATTTGAGGCATGTAGGGAAACACTATGGTGGAAACGTGATGAGGAGGTTGCTCTTCAACAAAAGGTACTTTGGTAATGGTAGTGAAGATGGTGGTCCTGGTGCTGAGGAATTGGAGTATGTTGAAGCAATCTTCGCTGTGGTAAGCCACCTTTTTGCATTCCCAATTTCTGATTATCTTCCATGGTTGTGGTGGCTTGATTTTGAAGGTCATAACAAAATATTAAAGGAAGCTACTAACACCATAAGGAAGTACCATGATCCAATCATTGAAGAAAGGATTCATCAATGGAAGAAAGGGACAAGGACACATCAAGATGATTGGCTTGATATTCTCATCTCATTGAAAGATGCCAATAAAAATCCGCTTTTGACTGTGGAGGAAATCAAAAGCTTAATTATGGAAACTGCAATTGGAACAATAGATAATCCATATAATAATGTTGAATGGGTACTTTCTGAAATGCTAAATCAACCAGAGCTACTTCAAAAGGTGACCGAAGAATTGGATAGTGTGTTGGGAAAAGAGAGATTACTGCAAGAATCCGACATTCCAAAACTCAACTATACGAAGGCATGTTTAAGAGAAGGTTTTCGCCTTCACCCAATTATAGACTTCAATGCTCCTCATGTCTTAATGAAAGACACAATTGTTGCTGATTACTTCATTCCAAAGGGTAGCCATATTCTTATTAGGAGACAAGGTATTGGCCATAATCCTAGACTTTGGGAAGAACCATGGAAATTTAAACCAGGAAGGCATTTGTCTACAAATAATGGATGTGATTTGAGTTTGGCTGAGCAAAATTTGGAGTTGTTCACATTCGGTGCTGGAAGAAGAGGTTGCCCTGCAATTACACTTGGGACTACCGTTACTGTAATGCTCTTTGCAAGGTTGGTTCATGGATTCATTTGGATTCCACCTTCCAATGAACCAATGATTGATCTCTCTGAACTTGAAAGTAACACCACAAAAGCTAAGCCACTAGTTGCACTGGGAAAGCCAAGATTACCTGCCAGAGTTTATCATCAATTGAATTAA 1575 0.4 MEFAPAFLLILFFTIPLFIIKLFKHNYSPKKSKQPRLPPGPNPWPIVGNLPEMLVNKPVFRWIQNIMNDLNTEIACIRLGNIHVIPVTSPSIAHEFLVKQDAIFASRPLNWSSKYVSSGFLTISLTPFGEQWKKMKRIMVEELLSPKRHQWMHDRRVEESDNLVRYVYNQIKNGSGLVDLRHVGKHYGGNVMRRLLFNKRYFGNGSEDGGPGAEELEYVEAIFAVVSHLFAFPISDYLPWLWWLDFEGHNKILKEATNTIRKYHDPIIEERIHQWKKGTRTHQDDWLDILISLKDANKNPLLTVEEIKSLIMETAIGTIDNPYNNVEWVLSEMLNQPELLQKVTEELDSVLGKERLLQESDIPKLNYTKACLREGFRLHPIIDFNAPHVLMKDTIVADYFIPKGSHILIRRQGIGHNPRLWEEPWKFKPGRHLSTNNGCDLSLAEQNLELFTFGAGRRGCPAITLGTTVTVMLFARLVHGFIWIPPSNEPMIDLSELESNTTKAKPLVALGKPRLPARVYHQLN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1130g00002 524 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 SUPERFAMILY Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PRINTS P450 superfamily signature 335 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 Pfam Cytochrome P450 38 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00002 524 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 11 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1130g00002 Stsc-Chr1130 15199 16868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1130g00002 3 520 Cytochrome P450 AT4G39950 50.962 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1130g00002 - K13027 qsa:O6P43_020443 622.468