Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1130g00001 ATGGAATTTGGTCCTACGATGTTCTTGCTTATGCTATTTTGCATTATAGCTCTCTTAATCAAACTCCTCAAACTCAATAATTCATCAAAGAAGCTTAGGCTCCCACCAGGTCCCAAACCATGGCCTATAATCGGTAACCTCCTTGAAATGCTTGCTAACAAACCCACTCTTAGATGGATACAAAACATCATGAATGATCTCAAAACCGAAATTGCATGCATCCAATTAGGTAACATCTATGTCATCCCGGTGACTAGTCCTTCCATTGCACGCGAGATTTTAATGAAACAAGACGCGATCTTCGCATCAAGACCATTGAGTTGGTCAAGTAAATATGTCTCGTCCGGATACTTAACCACAACTATAACACCCTTTGGAGAACAATGGAAGAAAATGAAGAGAGTCATGGTTGAGGAATTGATTTCACCTAAAAGGCATCAATGGCAGCATGACAAAAGGGTGGAAGAAGGCGACAACCTTGTTCATTACGTGTATAACCAAATCAAGAATGGTAGCGGCCTTGTGGATTTGAGGCATGTAGGGCAACACTATGGTGGAAACTTGATTAGGAGGTTGCTCTTCAATAAGAGGTACTTTGGTAATGGTAGTGAAGATGGTGGTCCTGGTGCTGAGGAATTGGAGTATGTTGATGCACTCTTCTTTGTGGTGAGGCACATTTATGCATTCTCTGTTTCTGATTATCTTCCTTGGTTGAGGTGGCTTGATTTTGAAGGTCATAGGAAAATATTGAAGAAAGCTACTGATACCATAAGGAAGTACCATGATCCCATCGTTGAAGAAAGGATTCATCAATGGAGGAATGAGAAAAGGACACATCAAGAGGATTGGCTTGATGTTCTTATCTCCTTGAAAGATGCAAACAACAATCCATTTTTGACTCTGGAGGAAATCAAGAGTCAAATTCTGGTAACATTTTTTCCCGTTTAA 948 0.404 MEFGPTMFLLMLFCIIALLIKLLKLNNSSKKLRLPPGPKPWPIIGNLLEMLANKPTLRWIQNIMNDLKTEIACIQLGNIYVIPVTSPSIAREILMKQDAIFASRPLSWSSKYVSSGYLTTTITPFGEQWKKMKRVMVEELISPKRHQWQHDKRVEEGDNLVHYVYNQIKNGSGLVDLRHVGQHYGGNLIRRLLFNKRYFGNGSEDGGPGAEELEYVDALFFVVRHIYAFSVSDYLPWLRWLDFEGHRKILKKATDTIRKYHDPIVEERIHQWRNEKRTHQEDWLDVLISLKDANNNPFLTLEEIKSQILVTFFPV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1130g00001 315 PANTHER CYTOCHROME P450 FAMILY 1 8 312 - -
Stsc1130g00001 315 Gene3D Cytochrome P450 21 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00001 315 Pfam Cytochrome P450 35 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1130g00001 315 SUPERFAMILY Cytochrome P450 29 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1130g00001 Stsc-Chr1130 2055 3002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1130g00001 16 308 Cytochrome P450 AT4G39950 51.361 1.95e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1130g00001 - K12153 lja:Lj0g3v0058079.1 407.142