Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1128g00005 ATGGCAGCCAAAAGTAGTGATGACTTGAAGCTTTTGGGTGGATGGTTCAGTCCATTTGCCACAAGGGTGAAGATTGCTCTTAACATAAAAGGATTGGAATATGAGAATATTGAAGAGGACTTGAACTCCAAAAGTGACCTCCTTCTTCGTTCAAATCCTGTGCACAAGAAAATCCCTGTTCTAATTCATGGTGAGAAACCCATATGTGAATCCTCAATCATAGTTGAATATATTGATGAGGTTTGGTCCAATGCTCCTTCTATCCTTCCGCAAGATGCTTATGACAGAGCAATTGCTAGATTCTGGGTTTCATACATTGATGACAAGTTATTGGCTTGCTTGAAAAACATTCTAGCTGGTGGTGAAGATGAAGAGGAGAAGAAGCCACACTTTGAGCAATTGGAAGAAGAAGTGCTTGTGAGGTTGGAAGAGGCATTCAACAAATGCAGTTATGGAAAGCCCTTCTTTGGAGGCAACAACGTTGGATTCATTGACATTAGCTTTGGTTGCTTCTTGCCTTTTATGCGTGTCATAGAAGAGCTTAATGGAAAGAAGGTTCTCGTCGACGATAAATTTCCGGCGTTAGCGAATTGGGCTGCGAATTTTGCTGCAGATTCAGTTGTTATTGAAACTCTTCCTGAGATCGACAAACTTGTTTTGTTTGCTAAAGCTCTTCAGCAAAAATGGGCTGCTGCTAAAGCTGCTGCCCAGTAA 714 0.4146 MAAKSSDDLKLLGGWFSPFATRVKIALNIKGLEYENIEEDLNSKSDLLLRSNPVHKKIPVLIHGEKPICESSIIVEYIDEVWSNAPSILPQDAYDRAIARFWVSYIDDKLLACLKNILAGGEDEEEKKPHFEQLEEEVLVRLEEAFNKCSYGKPFFGGNNVGFIDISFGCFLPFMRVIEELNGKKVLVDDKFPALANWAANFAADSVVIETLPEIDKLVLFAKALQQKWAAAKAAAQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1128g00005 237 CDD GST_C_Tau 93 225 IPR045074 GO:0004364|GO:0006749
Stsc1128g00005 237 SUPERFAMILY GST C-terminal domain-like 80 228 IPR036282 -
Stsc1128g00005 237 Pfam Glutathione S-transferase, C-terminal domain 101 204 IPR004046 -
Stsc1128g00005 237 FunFam Glutathione S-transferase U9 89 232 - -
Stsc1128g00005 237 Gene3D Glutaredoxin 1 88 - -
Stsc1128g00005 237 Gene3D - 89 234 - -
Stsc1128g00005 237 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 231 IPR010987 -
Stsc1128g00005 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Stsc1128g00005 237 Pfam Glutathione S-transferase, N-terminal domain 9 80 IPR004045 -
Stsc1128g00005 237 CDD GST_N_Tau 9 82 - -
Stsc1128g00005 237 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Stsc1128g00005 237 SFLD Main (cytGST) 6 234 - -
Stsc1128g00005 237 SFLD Main.3: Omega- and Tau-like 6 234 IPR045073 -
Stsc1128g00005 237 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 217 IPR045073 -
Stsc1128g00005 237 FunFam Glutathione S-transferase GSTU6 4 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1128g00005 Stsc-Chr1128 13381 17025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1128g00005 5 228 Glutathione S-transferase Gene Family AT1G10370 53.778 9.38e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1128g00005 K00799 - gmx:547576 285.804