Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1113g00001 ATGGCGTCTGCATCATCCGGTCGCGGCTCCAAGGGCTTCGATTTCGCTTCCGATGACATCCTCTGCTCCTACGAAGACTTCCCCAACCAGGACTCTTCTAACGGCACTCACGATGACCCCGCCAAGGATTTTCACAAATCAAGGATGGCAAGGACATCTATATTTCCTGATACTGCTTATAATTCGCCTGAAGATTCTATAAGCCAAGATGTGATTGCAGCTGTGGAGAAGAGCATGAAAAAAAATGCTGACAACCTTATGCGGTTTCTTGAAGGAATTAGCTCAAGGCTATCACAGTTGGAATTATATTGTTACAACATTGACAAATCAATTGGAGAAATGCGATCTGAATTAAACACTGACCAGGGGGAGGCGGATTTAAAGCTCAATTCTCTTGAGAAACACATTCAGGAAGTACACAGATCTGTACAAATTTTGAGAGACAAGCAAGAGCTAGCTGATACTCAGAAGGAGTTAGCCAAGCTTCAGCTTGCTCAGAAAGAATCATCCTCCACTAGCCATTCACATTCCAATGAGGAGAGGTCTTCGCCTTCTGCCACTGATCCAAAAAGGACCGATAAGGCATCTGACGCACATAACCAGCAGTTAGCTCTTGCCTTGCCTCATCAAGTTGCCCCACCGCAACAGCCTGTGGCACTGCCCCCAGCCCCAGCTCCAGCTCCGGCCCCAAATGTAGCACCAGTCACTCAACAACCATCTTATTACATTCCACCCACTCCTTTGCCCAATCCGCCATCTGTGGCCCAAGTTCCTCAGAATCAATATTTGCCCTCTGATCAGCAGTATAGAACTCCACAACCAACTTCATCGCAAGCAACTCAATCTCTGCCTATTCAACAATATTCTCAGTATCAGCAACCACAGCCTTCACAGCAGCAGTGGCCTCAGCAGGTGCAACCTCCACAACCACCCCCAATGCAGTCACAGATGAGACCCCCTTCATCCAATGTTTACACTCCTTACCCGCCAAACCATGCTACAAATCCCTCTCCCTCAGAAACACTACCGAACAGCATGCCAATGCAAATACCATATTCTGGAATTCCACCTGCAGCTTCTGGACGTAACGATGCCATGCCGTATGGATACAGTGGAGCTGGTAGAACAGGTCCGCAGCAACCACTTACCCCGCAAATCAAGGGCTCTTTTCCAGCACAACCAGGTGATCCATATGGAACTAGTGCTACTCATGCCGCACACCCTCCTACTAGTGCATACATGATCTATGATAGTGAAGGAGGAAGAACACATCCTCCCCCACAACCTTCTCATTTTGCTCAAGCTGGATACCCCCCATCGAATGCTTTGCTTCAGAACCCTGCACCGCATAACCCCATGGTCCGGAATCCTAGCCAAACACAATATATTCGTGGCCATCCCTACAGTGACTTGATTGAGAAGTTGGTGAACATGGGATTTAGAGGTGATCATGTGGCAGGGGTGATCCAGAGGATGGAGGAAAGTGGGCAGCCTATAGATTTTAACTCGGTACTTGACCGGTTGAATGTGCATGGTTCTGTTGGTCCCCAGAGGGCATGGTCAGGGTAA 1569 0.4844 MASASSGRGSKGFDFASDDILCSYEDFPNQDSSNGTHDDPAKDFHKSRMARTSIFPDTAYNSPEDSISQDVIAAVEKSMKKNADNLMRFLEGISSRLSQLELYCYNIDKSIGEMRSELNTDQGEADLKLNSLEKHIQEVHRSVQILRDKQELADTQKELAKLQLAQKESSSTSHSHSNEERSSPSATDPKRTDKASDAHNQQLALALPHQVAPPQQPVALPPAPAPAPAPNVAPVTQQPSYYIPPTPLPNPPSVAQVPQNQYLPSDQQYRTPQPTSSQATQSLPIQQYSQYQQPQPSQQQWPQQVQPPQPPPMQSQMRPPSSNVYTPYPPNHATNPSPSETLPNSMPMQIPYSGIPPAASGRNDAMPYGYSGAGRTGPQQPLTPQIKGSFPAQPGDPYGTSATHAAHPPTSAYMIYDSEGGRTHPPPQPSHFAQAGYPPSNALLQNPAPHNPMVRNPSQTQYIRGHPYSDLIEKLVNMGFRGDHVAGVIQRMEESGQPIDFNSVLDRLNVHGSVGPQRAWSG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 163 180 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 301 336 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 214 233 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 26 48 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 163 198 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 181 197 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 213 382 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 255 300 - -
Stsc1113g00001 522 Pfam UBA-like domain (DUF1421) 468 512 IPR010820 -
Stsc1113g00001 522 Coils Coil 129 165 - -
Stsc1113g00001 522 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 6 522 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 240 254 - -
Stsc1113g00001 522 MobiDBLite consensus disorder prediction 412 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1113g00001 Stsc-Chr1113 8663 11891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1113g00001 52 244 Trihelix Transcription Factor Family AT5G14540 32.124 7.12e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1113g00001 - - aip:107610486 827.78