Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1108g00002 ATGGAGATTAGTGCCATCATGGCTTCAGCAACTCCAAGACCTTCTCTTCCATCTCCATCTTCTTCTTCTTCTTCAACATTACTCTCAAACTCAAAGTTGCCACTGTTGAAGCGCTCATCACACATAACACTTCCAACCTCAACCACCATTTCACTTCTCGCACTCTTTTCTCCACCCCATGAAGCCAAAGCTGCTCTCACCATCCCCAAGGACCAGATTGTTTCTTCTCTCAACGATGTGGAGAAGACGATCGATCAGGTTCAGGTGGTGGGTTCGAGCTTTTTCGATGCGGCACAGCGTGTTTTTGAGATTGTAGGGAATGCTTTGAAGCCTGGAATCGATGCTGCGATGCCGATTGTGCAGCAGGCTGGGGAGGAGGCCTTGAAGATAGCTTCCCCTGCCATCTCTGAAGCTTCAAAGAAGGCACAAGAAGCACTTCAAAGCACTGGTGTTGACCCTCAACCTGTCATCACTGCTGCCAAGACAGTCGTGGACACAGCGCAACAAACAACCAAGGTGATTGAAGGTGCCAAGCCAATAGCTTCGGCAACTGTCGAAACCATATCTTCTTCGGATCCTACTGTGATTGCTGGAACAGCTGGAGCAGCATTTATTGCATACCTCTTACTTCCTCCAATTTGGTCTGCCATCACCTTCAACTTCCGTGGTTACAAAGGTGAGCTTACGCCTGCTCAAACCCTTGATCTGATATCAACACAAAACTACTTCATGGTTGATATTAGATCAGAGAAAGATAAGGACAAGGCCGGTGTTCCTCGCCTTCCCTCTAGCGCCAAAAACAGATTGATTGCCATTCCATTGGAAGAATTGCCAAGCAAGCTCAAAGGACTTGTTAGGAATGTGAAGAAAGTGGAAGCTGAAATAGCAGCTTTGAAGATTTCCTACTTAAAGAAGATCAACAAAGGCTCCAACATTGTGATCATTGACTCGTACTCGGACTCGGCGAAAATAGTAGCGAGAACATTAACGAGCCTTGGTTTCAAGAACACGTGGATCGTGGCGGACGGATTCTCGGGAAACAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATACTTTTCTTCGTTTGCAGAGGTGCTGTCTCCATCCAGAGTGATCCCTGCAGCTGTTAGAGGTTTTGGTACAACCTCCCAATCTAGTGCAAAACTTCTTCCTGGAGCTGATTGA 1191 0.4677 MEISAIMASATPRPSLPSPSSSSSSTLLSNSKLPLLKRSSHITLPTSTTISLLALFSPPHEAKAALTIPKDQIVSSLNDVEKTIDQVQVVGSSFFDAAQRVFEIVGNALKPGIDAAMPIVQQAGEEALKIASPAISEASKKAQEALQSTGVDPQPVITAAKTVVDTAQQTTKVIEGAKPIASATVETISSSDPTVIAGTAGAAFIAYLLLPPIWSAITFNFRGYKGELTPAQTLDLISTQNYFMVDIRSEKDKDKAGVPRLPSSAKNRLIAIPLEELPSKLKGLVRNVKKVEAEIAALKISYLKKINKGSNIVIIDSYSDSAKIVARTLTSLGFKNTWIVADGFSGNKGWLQSRLGTDSYFSSFAEVLSPSRVIPAAVRGFGTTSQSSAKLLPGAD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1108g00002 396 Gene3D - 226 363 IPR036873 -
Stsc1108g00002 396 ProSiteProfiles Rhodanese domain profile. 238 359 IPR001763 -
Stsc1108g00002 396 CDD RHOD 232 346 - -
Stsc1108g00002 396 MobiDBLite consensus disorder prediction 11 28 - -
Stsc1108g00002 396 MobiDBLite consensus disorder prediction 1 28 - -
Stsc1108g00002 396 Coils Coil 274 301 - -
Stsc1108g00002 396 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 36 357 IPR044690 GO:0009704|GO:0071277|GO:0090333
Stsc1108g00002 396 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 346 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1108g00002 Stsc-Chr1108 8671 11215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1108g00002 29 317 Sulfurtransferasese or Rhodanese AT5G23060 73.793 1.94e-157 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1108g00002 - - adu:107469155 690.649