Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc1100g00001 | ATGCTGGGGGACTCAGCTGTGTTAGGAACAGGAGGAGGCAGCTCTGGAGGAGGAGGAGCCGATGCAGTAGCCACAACGGCCGCAGCTACAACTACAGCTGCGGCCGTTATTACTACTGCATCAGCACCACCGCCACCACAATCAGCAGCACCCCTCGAAAGCGGTGCTGTTGAAATGGGTGGTGGCGGTGGTGGTGGTGGAGGCGGAGGGGGAGGATCGACCTCCGGGGACGAGGAGAAAGGAGAGAGGAGCTTCGGCGGGAACAGGTGGCCGAGACAAGAGACTTTGGCTTTGCTCAAAATACGGTCGGATATGGACGTGGCTTTTCGTGATGCCAGTGTTAAAGGTCCTTTGTGGGAAGAGGTTTCAAGGAAGCTAGCAGAGCTTGGGTACCACAGGAACGCGAAGAAATGCAAAGAGAAATTCGAGAATGTGTACAAGTATCACAAGAGAACCAAAGATGGTAGAACTGGAAAATCAGAAGGGAAAACATATAGATTCTTTGATCAATTAGAGGCACTTGAAAACAATCCAGCACCAGCACCAGCACCATCAGCAGCAGCATTGCAAGCAACACCAGTGTCCATGGTCAAAACAACTGCATCATTGCCATCACCTCCAATAATTACAACAATGCCACCACAGCAACAACAACAAGTAGTAGTAGTGAGTAGTAGTGCCACCACTACTGTTCCATCAATAGCTACCACTACTATTTCAATGCCTCAAATTATTCAACCCATTAATAATAATAATATTAATAATAATAATAATAATTCTGGATATTTTCCACCACCACCTCCACCGGTCTCTTCATCTTTTCCTAGTATTCCGGCGGGGCTACTCTCGAATTCGAGTTCGTCTTCGACTTCGTCGGAGGAGACGATCGAAGGAGGGAGTAGGCGCAACAAGAGGAAGAGAAGGTGGAAGGATTTCTTCGAGAAGCTAATGAAGGAGGTGATTGAGAAGCAGGAGGATCTGCAGAAGAGGTTCCTTGAAGCAATAGAGAAGAGGGAGAAAGAGAGATCCGCAAGAGAAGAATCATGGAGGTTGCAAGAGTTACAAAGAATCAATAAGGAAAGAGAGATTCTCGCTCAAGAGAGATCCATCGCCGCCGCCAAAGATCAAGCTGTTATGTCCTTCTTGCACAAAATTGCTGAACAACAAAACCTCCCTACGCCATTGAACAATGTTTATCAGCCACCGCCTCCGCCGCCGCCGCCGCCACCGGTCGTAGTGCAGCAGCAACAACAACCACATATTACTACTACTGTAGCTGCTGTTGCTGCTGCGACTATGCCAGTGGTGGTGCCATTGGCGACACCACCACGGCCGCCGCCGCCGTCGGAGATCGTGAAATTTATTGATGATAGCAACAACAATGGTGAGAATAACACTTCAACATTGACGCCGAGTTCTTCGCGGTGGCCGAAAGCGGAGGTAGAGGCCTTGATAAACCTGAGAACAAGCCTTGATGCGAAGTACCAAGAGAATGGACCGAAAGGGCCATTGTGGGAAGAGATTTCGGCATTGATGAGGAAGCATGGTTATAACAGGAACGCTAAGAGGTGCAAAGAGAAGTGGGAGAATATCAACAAGTATTTCAAGAAAGTGAAAGAGAGTAACAAGAAGAGGCCTGAAGATTCCAAGACTTGTCCTTATTTTCACCAGCTTGATGCTCTTTACAGGGAGAAGAAAGGAGCCAAGCAAGACGGTGGTGGTGGTGCTCCGGCCATTACCACAACTCCGTTGATGGTAAGGCCGGAGCAGCAGTGGCCGCCTCAGGCGGAGGCTCCGCCGTCGTCAGCGTTGCAGCCGAGGGAAGTAACCATGGAAGACGCCCAGAAGGGAGATAATGAGGAGATGGAGGAGGAGGAGAAGGATAATATTGGTGATGAAGAGGACGAAGATGACGACGACGAAGATGACGATGAAGGTGGTGGGAACTATGAGATTGTGGCAAGCAAGCCAGTTTCTGCTGAGTGA | 1986 | 0.4945 | MLGDSAVLGTGGGSSGGGGADAVATTAAATTTAAAVITTASAPPPPQSAAPLESGAVEMGGGGGGGGGGGGGSTSGDEEKGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKDGRTGKSEGKTYRFFDQLEALENNPAPAPAPSAAALQATPVSMVKTTASLPSPPIITTMPPQQQQQVVVVSSSATTTVPSIATTTISMPQIIQPINNNNINNNNNNSGYFPPPPPPVSSSFPSIPAGLLSNSSSSSTSSEETIEGGSRRNKRKRRWKDFFEKLMKEVIEKQEDLQKRFLEAIEKREKERSAREESWRLQELQRINKEREILAQERSIAAAKDQAVMSFLHKIAEQQNLPTPLNNVYQPPPPPPPPPPVVVQQQQQPHITTTVAAVAAATMPVVVPLATPPRPPPPSEIVKFIDDSNNNGENNTSTLTPSSSRWPKAEVEALINLRTSLDAKYQENGPKGPLWEEISALMRKHGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKKGAKQDGGGGAPAITTTPLMVRPEQQWPPQAEAPPSSALQPREVTMEDAQKGDNEEMEEEEKDNIGDEEDEDDDDEDDDEGGGNYEIVASKPVSAE | 661 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc1100g00001 | 661 | FunFam | Trihelix transcription factor GT-2 | 476 | 537 | - | - | |
Stsc1100g00001 | 661 | ProSiteProfiles | Myb-like domain profile. | 88 | 146 | IPR001005 | - | |
Stsc1100g00001 | 661 | CDD | GT1 | 88 | 153 | - | - | |
Stsc1100g00001 | 661 | CDD | GT1 | 474 | 539 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 276 | 296 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 396 | 413 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 393 | 413 | - | - | |
Stsc1100g00001 | 661 | ProSiteProfiles | Myb-like domain profile. | 474 | 532 | IPR001005 | - | |
Stsc1100g00001 | 661 | Gene3D | - | 476 | 537 | - | - | |
Stsc1100g00001 | 661 | Gene3D | - | 90 | 151 | - | - | |
Stsc1100g00001 | 661 | PANTHER | FI21293P1 | 44 | 613 | - | - | |
Stsc1100g00001 | 661 | FunFam | Trihelix transcription factor GT-2 | 90 | 151 | - | - | |
Stsc1100g00001 | 661 | SMART | sant | 472 | 534 | IPR001005 | - | |
Stsc1100g00001 | 661 | SMART | sant | 86 | 148 | IPR001005 | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 456 | 475 | - | - | |
Stsc1100g00001 | 661 | Coils | Coil | 310 | 337 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 566 | 661 | - | - | |
Stsc1100g00001 | 661 | Pfam | Myb/SANT-like DNA-binding domain | 474 | 561 | IPR044822 | - | |
Stsc1100g00001 | 661 | Pfam | Myb/SANT-like DNA-binding domain | 88 | 174 | IPR044822 | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 617 | 648 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 250 | 305 | - | - | |
Stsc1100g00001 | 661 | MobiDBLite | consensus disorder prediction | 37 | 91 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc1100g00001 | Stsc-Chr1100 | 6573 | 9928 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc1100g00001 | 78 | 592 | Trihelix Transcription Factor Family | AT1G76880 | 53.321 | 4.17e-156 | 461 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Stsc1100g00001 | Myb_DNA-bind_4 | 2.6e-22 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc1100g00001 | - | - | gmx:547624 | 542.347 |