Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc10g00064 ATGGTTATTTTTCCATCGTTTGTCAATGGATTGGCGCGAACCGTGTCCATCAAGAAAGAGAAGAAGTGCCAGAAAGATGATGGAAGAAGAGCCGTGAAAGAAATGGCAAAGGAAGCAAGGAAGAATGATTTGTTATTGAAATCATCAGGAGTTGTGAAGTCCACAAAGGCCAACAGCTTTGTGTCTGTATTCACAAATAAGGGCCAGAAAGGAGTCAATCAAGATCGTGTCCTTGTTTGGGAGGAATTTGGTTGCCAAGGGGACTTGATGTTATGTGGAATTTTTGATGGACATGGCCCTTGGGGACACTTAGTAGCCAAGAGGGTGAGGAAACTAGTCCCAGCTTTTCTTCTATGCAATTGGCAACAAACTGTGGCTTCAACATCACTTGACCTGGATATTAAGCTGGAAGCAGATGAATTTATCCATGGATTTGATGTATGGAAGCAATCCTACTTAAAGTCTTATGATGCCATTGATCAAGATCTAAAGCACCATACTGGGATTGATTCCTTTCGAAGTGGTACTACAGCTTTGACAATTATCAAACAGGGAGATTATCTGATAACAGCAAACCTAGGTGATTCTAGAGCTGTCCTAGCAACAACTTCAGAGGATGGGAAATTGATTCCAATTCAGCTAACCACAGACTTGAAACCAAATTTACCAGAGGAGGCGAAGCGAATAAGGGAATCAGGAGGGGAGGTGTATTGTATGGAAGATGAAGGAGGAGTATACAGAGCATGGATGCCTAGTGGTAGATCAGCAGGGCTTGCAATTTCAAGAGCTTTTGGTGATCACTGCATGAAGGACTTTGGATTAATATCTGTGCCAGAAGTCACACACACAAAACTCACCAAAAGGGATCAATTTGTAATATTGGCTTCAGATGGGGTATGGGATGTTTTGTCAAATGAGGAAGCAGTGAAGATTGCGTCTTCTTCTTCTTCATCATCTTCAGGGGGAGAAAGAGCAGCAGAAAGGGTAGTGAAACGTGCAATCCATGAATGGAAACGCAAGAGAAGTAGCATTGCTATGGATGATATGTCTGTCATTTGCCTCTTTTTTCATTCTCACTCTGTCTCATCAGCTTCCTCCAACTAA 1104 0.423 MVIFPSFVNGLARTVSIKKEKKCQKDDGRRAVKEMAKEARKNDLLLKSSGVVKSTKANSFVSVFTNKGQKGVNQDRVLVWEEFGCQGDLMLCGIFDGHGPWGHLVAKRVRKLVPAFLLCNWQQTVASTSLDLDIKLEADEFIHGFDVWKQSYLKSYDAIDQDLKHHTGIDSFRSGTTALTIIKQGDYLITANLGDSRAVLATTSEDGKLIPIQLTTDLKPNLPEEAKRIRESGGEVYCMEDEGGVYRAWMPSGRSAGLAISRAFGDHCMKDFGLISVPEVTHTKLTKRDQFVILASDGVWDVLSNEEAVKIASSSSSSSSGGERAAERVVKRAIHEWKRKRSSIAMDDMSVICLFFHSHSVSSASSN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc10g00064 367 CDD PP2Cc 60 356 IPR001932 -
Stsc10g00064 367 Pfam Protein phosphatase 2C 140 335 IPR001932 -
Stsc10g00064 367 SUPERFAMILY PP2C-like 54 357 IPR036457 -
Stsc10g00064 367 Gene3D - 46 358 IPR036457 -
Stsc10g00064 367 SMART PP2C_4 51 354 IPR001932 -
Stsc10g00064 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 356 IPR001932 -
Stsc10g00064 367 PANTHER PROTEIN PHOSPHATASE 41 354 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc10g00064 Stsc-Chr10 287949 290349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc10g00064 4 357 PP2C-type Phosphatase Gene Family AT3G05640 53.652 1.23e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc10g00064 - - gmx:100817397 577.4