Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc10g00043 ATGGCAAGGTGGCTGCAGTCCGCCGGCCTGCAGCATCTGGCCTCTCCCTTGGCCTCCACCACCGCTATCGACCAACGCCTCCTTCCAAACCTCCTCATGCAGGGTTATGGGGCACAATCTGCTGAAGAGAAGCAGAGGCTTTTCAAGTTGATGAGAAACCTCAATTTTAATGGGGAGTCTGGTTCAGAGCCATATACACCCACTGCACAAAGCTTTGGTGGAGTGGCTGCATCGGAAGGGTTTTATTCTCCTGAGTTCCGGGGGGATTTTGGAGCTGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTCTGTCAGAGCATGTTATTTCAGAGCCCTTTGAGCCGTCGCCCTTCATGCCTGGAGGTACCAGAGTATTTGAAGATGACTTAAATCCAATTAGCAGCAATCAGGAACGTGGAGAGGCAGATGCTGATGCATCAAGTTCTCTACCTGTGAATGAAAAGGAGAATAGTACAAGAGAAAATAATGTTGCTAAGATCAAAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTCGCCAAGAAGGAGGATGATATTGTAACTGTATATGACAATGCATATTTGACAGTCCATGAACCCAAGTTGAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTCTGGATGAAAATGTTACCAATGATGAAGTATATCGAGTTACAGTCGAGCCAATTATTCCTACAATTTTTCAGAGGACCAAAGCTACCTGCTTTGCATATGGTCAGACAGGTAGTGGCAAAACATACACAATGCAACCTTTACCACTCCGAGCTGCCGAAGACCTTGTTAGGAGGTTGCATCAACCAGTTTACCGAAATCAGAAATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAGCTTTTTGATCTTCTGAGTGACAGAAAGAAACTCTGCATGAGAGAAGATGGACGTCAGCAAGTTTGTATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATTGAAAGGGGGAATGCTGCAAGAAGTACTGGATCAACAGGTGCTAATGAGGAGTCTTCCAGGTCACATGCTATCTTACAACTTGTTGTGAAGAGGCATAATGAGGTAAAAGAAAGCAGGCGTAACAATAACAACGATGGGAATGAGATGAAAAGTGGGAAGGTTGTAGGGAAGATTTCTTTCATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACTACGGATAATGACCGTCAGACACGGATTGAAGGAGCAGAAATCAATAAGAGCCTTTTAGCTTTGAAGGAATGCATACGTGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAACTTACGGAAGTGCTCCGTGACTCATTTGTTGGAAATTCAAAGACTGTTATGATCTCCTGTATATCACCAAATGCTGGGTCATGTGAACACACACTTAATACATTGAGATATGCAGATCGAGTTAAAAGTCTGTCTAAAAGTGGAAATCCTAGGAAAGACCAAGCCCCAAATCCAGTTCTGCAAACGACGAAGGAGATCTCATCCACATCATCCTTTCCAACTAGTGTTGATGCAGAGGAAGTTAATGATCAACGTCAAGAGGTGAAGGCAGTTGATATGGGCCGGGGAGTAGTTGAAAAGGAAAATTCGTTTTACAGCTCTGCTGCCGCTGATGTTGACAGGCAATCATCAAGTTTTTCCTCGAGTAGCATATTCAATGGGCGAGAGGACAAAAGCTTGGCTTCTGTCTCAACAGACAGGGAGAGGGTTGAAATGAAGAGTTCTTACAGCGATTCTACCAGTCAAAAGATGAACTCTAACTCCCAAAATGATGTGAATCAGAAAGTGCAAAAGGTGTCACCCCCACGCCGGAAAGGGACAAAGGATGAGAAACCTGAAAGGGCCACAAACTTGATGAAAAGGGATGCCAATGGTTCTGATCAGTGGAGCACAAGCTCCAAGCAGCAGAATTCCGGGAATTATAATACAGTTGCAACTGCACCCAGGCAGTCTGAAACAGAAACCCCTTCTGATGGAAATATCAATGCCATACTTGAGGAAGAAGAAGCACTACTTGCTGCTCATAGGAAAGAAATCGAGGATACAATGGAGATAGTTCGCGAAGAAATGAAATTATTGGCAGAAGTGGATCAGCCAGGAAGCCTTATCGACAACTATGTAACCCAGTTGAGTTTTGTTCTGTCACGCAAAGCAGCTAGTCTCGTCAGCCTTCAAGCCCGGCTCGCAAGATTCCAACACCGATTAAAAGAACAGGAGATACTAAGTAGAAAAAGAGTACCTCGTTGA 2346 0.4382 MARWLQSAGLQHLASPLASTTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTAQSFGGVAASEGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGTRVFEDDLNPISSNQERGEADADASSSLPVNEKENSTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRRLHQPVYRNQKFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIERGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESRRNNNNDGNEMKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVLQTTKEISSTSSFPTSVDAEEVNDQRQEVKAVDMGRGVVEKENSFYSSAAADVDRQSSSFSSSSIFNGREDKSLASVSTDRERVEMKSSYSDSTSQKMNSNSQNDVNQKVQKVSPPRRKGTKDEKPERATNLMKRDANGSDQWSTSSKQQNSGNYNTVATAPRQSETETPSDGNINAILEEEEALLAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc10g00043 781 Coils Coil 698 729 - -
Stsc10g00043 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 504 IPR027417 -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 635 653 - -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 540 554 - -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 508 539 - -
Stsc10g00043 781 ProSitePatterns Kinesin motor domain signature. 403 414 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc10g00043 781 MobiDBLite consensus disorder prediction 114 163 - -
Stsc10g00043 781 SMART kinesin_4 166 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 MobiDBLite consensus disorder prediction 608 630 - -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 568 592 - -
Stsc10g00043 781 FunFam Kinesin-like protein 147 507 - -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 654 692 - -
Stsc10g00043 781 PRINTS Kinesin heavy chain signature 359 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 PRINTS Kinesin heavy chain signature 249 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 PRINTS Kinesin heavy chain signature 404 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 PRINTS Kinesin heavy chain signature 454 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 MobiDBLite consensus disorder prediction 568 692 - -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 131 145 - -
Stsc10g00043 781 ProSiteProfiles Kinesin motor domain profile. 168 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 CDD KISc_KIF2_like 168 502 - -
Stsc10g00043 781 MobiDBLite consensus disorder prediction 504 554 - -
Stsc10g00043 781 PANTHER KINESIN-RELATED PROTEIN 6 1 779 IPR027640 GO:0003777|GO:0007018
Stsc10g00043 781 MobiDBLite consensus disorder prediction 593 607 - -
Stsc10g00043 781 Coils Coil 754 774 - -
Stsc10g00043 781 Pfam Kinesin motor domain 174 503 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc10g00043 781 Gene3D Kinesin motor domain 146 507 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc10g00043 Stsc-Chr10 194470 200019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc10g00043 160 504 Calmodulin-binding Proteins AT5G65930 33.803 2.15e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc10g00043 K10393 - gmx:100778915 1300.42