Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc10g00031 ATGCTTAGTGCTGAAGGAGAAATTAAAATAAGTTTTGGCTATCACTGCAACAATAGTGAAAGAGGTGGTATCCCTTGTGAGGTGGCCAATCGCCACAAGATCCTTCCTGAAGTCCGGAGGACAAGCAGTTTCTCGTGCTTGTCAGGTGCGGCCTTAAGTGCAAACGCTACACTCGCCAACACAAACCTCTGCAATGGTAAGATAGGAGGTGAAATCCTTCCAAGTTGGGACTCTCCTAATTCTTTTCGCAAGGTGCCCTCTTCACCAAGTCTTTCAAAGCTGGAAAGGCTATCATCTTCTCTCCCAAGTAGTTTATCTTACCTAAGTTGTAGTCCTTCCACCTCAAGTGATATACTAGAATATGACTCCTGCACATTCAAGTCCATGAGCGATCCTTCCAGAACTGAAGGTTTTCTCAATGCTACCGAACTACAAGTCGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTGTGTTCTGAAGAGAACGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCAGCTGACTTTCTAGCTGGTACACTCTATGACACCATCATATCTCACTTGAACAAGTTATTTTGGGAATTTGAGCCAGTTTCCATGGTAGCATCTGAAAATTTGATGAGTTTGGATGGAACCCCTCAGTATAATTTGGAGCAGAACCACAGCCTTATTTGTGATGCAGACCGATCACTATCTACAAATATGGGATGCTTTGCAAATGCAAAGAGTAGTAGCCCATCATGCAAGTCATTTTCACACAGGGTACTCGATAGCCTCCAATGCGCTCTTAGTCAAGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCGTCCAGATTTAGTTTCAATTGGATCTTGTGTTTTAGTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTGCGGGCGATGGAAGACTCAAGGCTATCCAGCTTACTGATAGCCATACAGTCGACAATGAAGCCGAAAGAGCTACACTTGTAGCCAATCATCCTGATGATCCAAAGGTTGTTGTAGCAGGAAAGGTGAAAGGGAAGCTAAAGGTTACTCGCGCCTTTGGAGTCGGCTACTTGAAAAAAAGAAATCTCAATGATGCTTTGATGGGAATCCTTCGAGTGCGTGATCTAACAAGCCCTCCATATATTTCCACTCAACCATCACTGAATGTCCATAAAATCTCAAATTCTGATCAATTTGTTGTAGTAGGGAGTGATGGTTTATTCGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTTGAGTCTTATATCTTGAGCAACCCTTTGGGAGATCCTGCAAAGTTTCTCATAGAAGAGCTTGTAGCTAGAGCAGCTCATTCTTCAGGTTTGACCATGGAAGAGTTGATGAATATTCCTGCTGGAAGAAGAAGGAAGTACCATGATGACGTGACTGTAATGGTGATCATGCTTGGGATGAATCAGAGGACTTCCAAGGCATCAACTTGCATCTAA 1545 0.4317 MLSAEGEIKISFGYHCNNSERGGIPCEVANRHKILPEVRRTSSFSCLSGAALSANATLANTNLCNGKIGGEILPSWDSPNSFRKVPSSPSLSKLERLSSSLPSSLSYLSCSPSTSSDILEYDSCTFKSMSDPSRTEGFLNATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISHLNKLFWEFEPVSMVASENLMSLDGTPQYNLEQNHSLICDADRSLSTNMGCFANAKSSSPSCKSFSHRVLDSLQCALSQAENDFLYMVEQEMEDRPDLVSIGSCVLVVLLHGNDLYTLNLGDSRAVLATCSAGDGRLKAIQLTDSHTVDNEAERATLVANHPDDPKVVVAGKVKGKLKVTRAFGVGYLKKRNLNDALMGILRVRDLTSPPYISTQPSLNVHKISNSDQFVVVGSDGLFDFFSNDEAVKLVESYILSNPLGDPAKFLIEELVARAAHSSGLTMEELMNIPAGRRRKYHDDVTVMVIMLGMNQRTSKASTCI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc10g00031 514 CDD PP2Cc 151 499 IPR001932 -
Stsc10g00031 514 FunFam Probable protein phosphatase 2C 40 119 510 - -
Stsc10g00031 514 SUPERFAMILY PP2C-like 152 502 IPR036457 -
Stsc10g00031 514 Gene3D - 107 510 IPR036457 -
Stsc10g00031 514 ProSiteProfiles PPM-type phosphatase domain profile. 138 501 IPR001932 -
Stsc10g00031 514 SMART PP2C_4 129 499 IPR001932 -
Stsc10g00031 514 PANTHER PROTEIN PHOSPHATASE 2C 144 499 IPR015655 GO:0004722|GO:0006470
Stsc10g00031 514 Pfam Protein phosphatase 2C 255 468 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc10g00031 Stsc-Chr10 159954 162877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc10g00031 6 514 PP2C-type Phosphatase Gene Family AT3G16560 63.158 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc10g00031 - - adu:107464162 793.882