Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc10g00030 ATGCTTAGTGCTGAAGGAGAAATTAAAATAAGTTTTGGCTATCACTGCAACAATAGTGAAAGAGGTGGTATCCCTTGTGAGGTGGCCAATCGCCACAAGATCCTTCCTGAAGTCCGGAGGACAAGCAGTTTCTCGTGCTTGTCAGGTGCGGCCTTAAGTGCAAACGCTACACTCGCCAACACAAACCTCTGCAATGGTAAGATAGGAGGTGAAATCCTTCCAAGTTGGGACTCTCCTAATTCTTTTCGCAAGGTGCCCTCTTCACCAAGTCTTTCAAAGCTGGAAAGGCTATCATCTTCTCTCCCAAGTAGTTTATCTTACCTAAGTTGTAGTCCTTCCACCTCAAGTGATATACTAGAATATGACTCCTGCACATTCAAGTCCATGAGCGATCCTTCCAGAACTGAAGGTTTTCTCAATGCTACCGAACTACAAGTCGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTGTGTTCTGAAGAGAACGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCAGCTGACTTTCTAGCTGGTACACTCTATGACACCATCATATCTCACTTGAACAAGTTATTTTGGGAATTTGAGCCAGTTTCCATGGTAGCATCTGAAAATTTGATGAGTTTGGATGGAACCCCTCAGTATAATTTGGAGCAGAACCACAGCCTTATTTGTGATGCAGACCGATCACTATCTACAAATATGGGATGCTTTGCAAATGCAAAGAGTAGTAGCCCATCATGCAAGTCATTTTCACACAGGGTACTCGATAGCCTCCAATGCGCTCTTAGTCAAGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCGTCCAGATTTAGTTTCAATTGGATCTTGTGTTTTAGTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTGCGGGCGATGGAAGACTCAAGGCTATCCAGCTTACTGATAGCCATACAGTCGACAATGAAGCCGAAAGAGCTACACTTGTAGCCAATCATCCTGATGATCCAAAGGTTGTTGTAGCAGGAAAGGTGAAAGGGAAGCTAAAGGTTACTCGCGCCTTTGGAGTCGGCTACTTGAAAAAAAGAAATCTCAATGATGCTTTGATGGGAATCCTTCGAGGAGTGATGGTTTATTCGACTTCTTCAGCAATGATGAGGCAGTAA 1233 0.4363 MLSAEGEIKISFGYHCNNSERGGIPCEVANRHKILPEVRRTSSFSCLSGAALSANATLANTNLCNGKIGGEILPSWDSPNSFRKVPSSPSLSKLERLSSSLPSSLSYLSCSPSTSSDILEYDSCTFKSMSDPSRTEGFLNATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISHLNKLFWEFEPVSMVASENLMSLDGTPQYNLEQNHSLICDADRSLSTNMGCFANAKSSSPSCKSFSHRVLDSLQCALSQAENDFLYMVEQEMEDRPDLVSIGSCVLVVLLHGNDLYTLNLGDSRAVLATCSAGDGRLKAIQLTDSHTVDNEAERATLVANHPDDPKVVVAGKVKGKLKVTRAFGVGYLKKRNLNDALMGILRGVMVYSTSSAMMRQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc10g00030 410 Pfam Protein phosphatase 2C 257 384 IPR001932 -
Stsc10g00030 410 SUPERFAMILY PP2C-like 151 383 IPR036457 -
Stsc10g00030 410 ProSiteProfiles PPM-type phosphatase domain profile. 138 410 IPR001932 -
Stsc10g00030 410 Gene3D - 106 402 IPR036457 -
Stsc10g00030 410 PANTHER PROTEIN PHOSPHATASE 2C 144 383 IPR015655 GO:0004722|GO:0006470
Stsc10g00030 410 SMART PP2C_4 129 409 IPR001932 -
Stsc10g00030 410 CDD PP2Cc 151 384 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc10g00030 Stsc-Chr10 159954 162877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc10g00030 6 396 PP2C-type Phosphatase Gene Family AT3G16560 61.519 4.32e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc10g00030 - - adu:107464162 649.047