Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc109g00013 ATGGGATCAGAGAAGATGAACGGTCAAGTGTCCACCCGTGTGTTGGGGACCACTGGATATCTGGCCCCAGAGTATGCCTCCACAGGAAAGCTTACCACAAAGTCGGATGTTTACAGCTATGGTGTGGTTCTTCTTGAATTGCTTACAGGGCGTGTACCAGTTGATATTAAGCGGGCCCCTGGAGAACATGTCCTTGTCTCTTGGGCTCTTCCAAGATTAACAAACAGAGAAAAAGTAGTGGAAATGGTTGACCCGGCTCTAAGGGGGCAATACTCAAAGAAGGATTTGATTCAGATAGCCGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTATAGGCCACTCATGACGGATGTTGTACAATCACTGATACCACTTGCTAGGAACCCATCTTCTCTTGGCTCATCAAGTTCTTTAAGGTTTCAGAAACAAACACCACTTCCAAGTCCAAGTCACTAA 462 0.4654 MGSEKMNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLARNPSSLGSSSSLRFQKQTPLPSPSH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc109g00013 153 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc109g00013 153 SUPERFAMILY Protein kinase-like (PK-like) 8 122 IPR011009 -
Stsc109g00013 153 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
Stsc109g00013 153 Pfam Protein tyrosine and serine/threonine kinase 17 124 IPR001245 GO:0004672|GO:0006468
Stsc109g00013 153 PANTHER OS07G0668900 PROTEIN 2 133 - -
Stsc109g00013 153 MobiDBLite consensus disorder prediction 132 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc109g00013 Stsc-Chr109 85058 86609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc109g00013 1 140 Receptor kinase-like Gene Family AT3G58690 72.222 1.83e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc109g00013 PK_Tyr_Ser-Thr 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc109g00013 - - aip:107618065 287.73