Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc1097g00002 | ATGACAAGATTCAAGGTAGCAGATATTCCGGGATTGGTATGTAAAGGGGCACCAGATTTCTGTACAGTATATGTGGTTTCAAAAGGAAAGATTCAATCAACAAGATCAGCTTCTCGTCCTGCTCCTTTCCTTTCTCCATTGCTTACTCAATCCACCAATTTCAATTCAGCCCCACGTTTGCCACTTCCCAAAGGCCTTGAAAGGCAATCATTTGATGGACCACGTAGATCACAAGACACAATAAGGTCGCCATTAACTCGAAAAGGAGTGAGTGAGAGATCATATACAGAAATATCATTGCCAGATTCAGACATTACATTTGTAAGTTCTGGAAGATCAAGCGTAGACCGGATGATTCCGTCGTTATACCTCGGATCGGATCACGGAATGTCGAATCCTCGACTATCATATGGCTCTAATCTATCCGGCTGCTCTGATATCATCAACATGGATAATGGAAACTGCAGCTTTGAATCAATTCTTCATCATCATCATCCAAGGATGTCTATGGATAGTCATGGCTCTCCTGAATTCTCATACATATCACATGATAGTGATGGTGTTTTATCTTCTTATTCCAATCCCGCGGATGATGTAGAGTTTGAAATGAGGAGGCTGAAGTTGGAGTTGAAGCAAACAATGGAAATGTACAGCACAGCATGTAAAGAAGCTCTCACAGCGAAACAGAAGGCTATAGAACTTCAACGTTGGAAGCTAGAAGAAGAGAGGAAACTAGAGGAGGCAAAGCTAGGAGAAGAAGCTGCATTAGCAATTGTAGAAATGGAGAAAGCAAAATCAAAAGCAGCTCTTGAGGCAGCTGATGCACAAAAGAGGATCGCAGAGCTAGAAGCACATAAGAGACTCAATGCTGAAATGAAAGCAATTAGAGAAGCTGAAGCAAAGAAGAGAGCACTTGATGCTCTTGCACAAAATGAGTTGAGGTGTAGAAAGTACTCAATTGAGGAAATTGAAGAAGCAACCAACCATTTTGCAAACTCCATGAAAATCGGAGAAGGCGGTTACGGTCCGGTTTTTAAGTGCCTTCTTGATCATACACCTGTTGCTGTCAAGGTTCTACGTCCTGATGCAGCACAAGGACGGTCCCAGTTTCAAAGAGAGGTTGAGGTACTAAGTTGCATCCGGCATCCAAACATGGTACTTCTCCTAGGAGCCTGTCCGGAATACGGATGCCTTGTCTACGAATACTTGGCAAACGGAAGTTTAGACGATCGCCTCTTTTGTAGAGGAAACACTCCCCCACTTCCTTGGCAAATACGGTTCAAAATAGCAGCCGAAATCGGCACCGGCTTGTTATTCCTCCACCAAACAAAGCCAGAGCCTCTTGTCCATAGAGATTTGAAGCCAGCCAATATCTTGCTTGACCGAAACTGCGTCGCCAAGATCAGCGACGTAGGCCTTGCTAGGCTAGTCCCTCCGTCCGTCGCTGACTCAGTCACACAATACCATATGACATCTGCTGCTGGAACATTTTGCTACATAGACCCTGAGTACCAGCAAACCGGAATGCTAGGTGTAAAATCTGATGTATACTCTCTTGGGATCATTTTTTTGCAAATTTTGACGGCGAAACCACCAATGGGATTGACTCATCATGTTGAGAAAGCTATTGAGAAGGGAACATTTGCGGATATGCTTGATCCTAATGTGTCTGATTGGCCAATGGAGGAGGCCTTGAGCCTCGCGAAAATTTCGATCCAATGTTCTGAGCTAAGGCGAAAGGATAGACCGGATCTCGGCAAGGAAGTCCTACCAATACTAGATGGGCTAAGGACATTGGCTGAAAATGGTGATCAACATTTCAGTGGCTATGTTAGCCCATCCAACCAGAGCCAGGTTTCTATTCAGTTGGATGGAGCCTCTTCTCCACTTGATTATTCTGGGGAAAGCCCAAGGAAGTCATCCATTTCAACCCCTTAG | 1938 | 0.4443 | MTRFKVADIPGLVCKGAPDFCTVYVVSKGKIQSTRSASRPAPFLSPLLTQSTNFNSAPRLPLPKGLERQSFDGPRRSQDTIRSPLTRKGVSERSYTEISLPDSDITFVSSGRSSVDRMIPSLYLGSDHGMSNPRLSYGSNLSGCSDIINMDNGNCSFESILHHHHPRMSMDSHGSPEFSYISHDSDGVLSSYSNPADDVEFEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKLEEERKLEEAKLGEEAALAIVEMEKAKSKAALEAADAQKRIAELEAHKRLNAEMKAIREAEAKKRALDALAQNELRCRKYSIEEIEEATNHFANSMKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYLANGSLDDRLFCRGNTPPLPWQIRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNCVAKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQILTAKPPMGLTHHVEKAIEKGTFADMLDPNVSDWPMEEALSLAKISIQCSELRRKDRPDLGKEVLPILDGLRTLAENGDQHFSGYVSPSNQSQVSIQLDGASSPLDYSGESPRKSSISTP | 645 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc1097g00002 | 645 | MobiDBLite | consensus disorder prediction | 76 | 94 | - | - | |
Stsc1097g00002 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 585 | IPR011009 | - | |
Stsc1097g00002 | 645 | Coils | Coil | 288 | 308 | - | - | |
Stsc1097g00002 | 645 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 448 | 460 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc1097g00002 | 645 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 302 | 402 | - | - | |
Stsc1097g00002 | 645 | SMART | serkin_6 | 330 | 593 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc1097g00002 | 645 | Pfam | Protein kinase domain | 332 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc1097g00002 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 308 | 402 | - | - | |
Stsc1097g00002 | 645 | ProSiteProfiles | Protein kinase domain profile. | 330 | 593 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc1097g00002 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 403 | 610 | - | - | |
Stsc1097g00002 | 645 | FunFam | U-box domain-containing protein 51 | 403 | 603 | - | - | |
Stsc1097g00002 | 645 | Coils | Coil | 222 | 242 | - | - | |
Stsc1097g00002 | 645 | Coils | Coil | 258 | 285 | - | - | |
Stsc1097g00002 | 645 | MobiDBLite | consensus disorder prediction | 54 | 94 | - | - | |
Stsc1097g00002 | 645 | Coils | Coil | 196 | 216 | - | - | |
Stsc1097g00002 | 645 | PANTHER | OS02G0152300 PROTEIN | 7 | 618 | - | - | |
Stsc1097g00002 | 645 | MobiDBLite | consensus disorder prediction | 609 | 645 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc1097g00002 | Stsc-Chr1097 | 11310 | 17244 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc1097g00002 | 1 | 621 | Receptor kinase-like Gene Family | AT1G78940 | 59.594 | 0.0 | 664 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Stsc1097g00002 | Pkinase | 7.1e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc1097g00002 | - | - | gmx:100779981 | 829.706 |