Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1096g00004 CAGTTTCCACATGACATTGATGATGAGTATACTCCGAAGGCTGGAATGACTTTCCCAACACTTGAAGAAGCTGCTGCTTTCTATAAGAGGTATGCTAAACGTGCAGGGTTTTCCACCAAAATAAGGAACACCAATAGGTGTAAGGAGACAAAGGAAGTTAAGAATCAACTAATCACATGTAATAGAGAGGGGAAATGGGTGTCTGAAATACCTTACGTTGAGAAGACAAACCCTACGTGCGATGCAAACTGTCCTGCGCGAATTTATGTGCATGCAGTGAAGAAAACAAGGCTCTGGTGTATTTCAAAGGTCGTTCTTCACCATTCACATCCATGCTGTCCTTATCAAGCCCAGATGTTACCTCAGCATAGGAAACTCAGCATGCAAGTTCGTTGCATTATTGAAAACAACGATCATTCGGCATTAGACCAAATCAAACATATAAATAACTTGTGA 456 0.4123 QFPHDIDDEYTPKAGMTFPTLEEAAAFYKRYAKRAGFSTKIRNTNRCKETKEVKNQLITCNREGKWVSEIPYVEKTNPTCDANCPARIYVHAVKKTRLWCISKVVLHHSHPCCPYQAQMLPQHRKLSMQVRCIIENNDHSALDQIKHINNL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1096g00004 151 Pfam FAR1 DNA-binding domain 27 113 IPR004330 -
Stsc1096g00004 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1096g00004 Stsc-Chr1096 18289 18744 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc1096g00004 FAR1 1.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1096g00004 - - aip:110271906 181.03