Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1091g00003 ATGTATAGACTGCCTTTCGTCGAGTGCCTCATGTTTGGGGCTCTTATATCCGCGACTGATCCCGTTACTGTTTTATCAATATTTCAGGAGCTTGGCACAGATGTCAACCTATATGCTTTGGTTTTCGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAAGACTCATCCATCTGGACAAAATTTATTAATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGTTCAATGTCTGCAGGTGTTGGAGTGGGATTCATATCTGCTTTGCTTTTTAAGTATGCAGGATTGGATATTGACAACCTTCAGAACCTGGAGAGTTGTCTTTTTGTTCTATTTCCATATTTCTCATACATGCTTGCAGAAGGTCTTGGTTTGTCTGGTATTGTATCAATACTGTTTACAGGAATAGTCATGAAGCACTATTCATACTCAAATTTGTCACAAAGTTCTCAACGATTTGTCTCTGCTTTTTTCGAGTTGATATCTTCCTTAGCAGAGACCTTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCGGCGAATGTCTTCTCTTGTGCTTATCTGGTCAATTTGGCCCGACCTTCACATCGAAAGATACCTCCAAAACACCAAAAAGCACTTTGGTATAGTGGACTTCGGGGAGCAATGGCCTTTGCCCTTGCATTGCAATCAGTTCATGATCTTCCAGAGGGACATGGGCAGACCATCTTTACTGCAACAACAGCAATAGTTGTTTTGACGGTGTTATTGATTGGTGGGTCAACGGGTACCATGCTGGAAAATCTAGATGTGGTTGGTGACAATCATGGTGATAGCTCTTTGGCCACAGTGGGCACCATCACAAACAATTATGAGGAAAACAATGGTTATATTGCTCCTTCTTATGATGAAGAATCATCATCAGGAAGCAGATTCAAGATGAAGCTAAAAGAATTTCATAAGAGTGCTGGATCATTTACTGCTATAGATAAAAACTTTCTGACCCCATTCTTTACAAGTCAAAATGGAGATGAAGATGAAGATGAGCCGTTGACTTCATCAAGACCGGGAATTAACCGTCCCAACCCTTATTCATCGTGA 1176 0.3997 MYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLLMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLARPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLENLDVVGDNHGDSSLATVGTITNNYEENNGYIAPSYDEESSSGSRFKMKLKEFHKSAGSFTAIDKNFLTPFFTSQNGDEDEDEPLTSSRPGINRPNPYSS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1091g00003 391 Gene3D - 6 58 - -
Stsc1091g00003 391 PANTHER SODIUM/HYDROGEN EXCHANGER 1 377 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc1091g00003 391 MobiDBLite consensus disorder prediction 362 391 - -
Stsc1091g00003 391 Pfam Sodium/hydrogen exchanger family 3 292 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1091g00003 Stsc-Chr1091 13288 18312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1091g00003 10 330 Antiporters AT3G05030 33.728 8.98e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1091g00003 K14724 - gmx:100790830 648.662