Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc107g00015 ATGGCTTCTCCAATTAGTGGAGGCTATTCAGGTTCTGGCTCTGGCTCTGAGGGAGACCCTCAGCAGCATATAATGGATCAAAGGAAGAGGAAGAGAATGCAGTCCAATAGGGAATCAGCAAGGAGATCAAGGATGAGGAAGCAGCAGCATCTTGATAGCCTGATTTCCCAGGCTGATGAGCTGAAGAAGGAGAACAGCCAGATCAGCACAAGCATAGGGATCACCACTGAGCTTTACCTCAACATTGAATCTGATAATGCAATCTTGAGGGCTCAGATGTCTGAACTTACCAACAGGTTGAACTCTCTCAATGATATCATCAATTACATGAACTCATCAATGTCTACCACCACCAACCACCACTTTCTTGCTGCTGCTGCTCATGAGGCTCAGGAGACTCATTTCAATGATTGTGGCTTCATGGACCCTTGGAACTCTCTTCCTGCTAATCATCCAATCATGGACATGTTGATGTATTGA 480 0.4562 MASPISGGYSGSGSGSEGDPQQHIMDQRKRKRMQSNRESARRSRMRKQQHLDSLISQADELKKENSQISTSIGITTELYLNIESDNAILRAQMSELTNRLNSLNDIINYMNSSMSTTTNHHFLAAAAHEAQETHFNDCGFMDPWNSLPANHPIMDMLMY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc107g00015 159 Pfam bZIP transcription factor 28 83 IPR004827 GO:0003700|GO:0006355
Stsc107g00015 159 Coils Coil 44 71 - -
Stsc107g00015 159 MobiDBLite consensus disorder prediction 22 49 - -
Stsc107g00015 159 MobiDBLite consensus disorder prediction 1 49 - -
Stsc107g00015 159 FunFam BZIP transcription factor 26 77 - -
Stsc107g00015 159 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Stsc107g00015 159 SUPERFAMILY Leucine zipper domain 28 81 IPR046347 GO:0003700|GO:0006355
Stsc107g00015 159 Coils Coil 79 106 - -
Stsc107g00015 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 72 IPR004827 GO:0003700|GO:0006355
Stsc107g00015 159 MobiDBLite consensus disorder prediction 1 21 - -
Stsc107g00015 159 Gene3D - 26 81 - -
Stsc107g00015 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 144 - -
Stsc107g00015 159 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Stsc107g00015 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc107g00015 Stsc-Chr107 72666 73145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc107g00015 21 159 bZIP Transcription Factor Family AT4G34590 48.252 4.60e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc107g00015 bZIP_1 2.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc107g00015 K25786 - gmx:778139 172.94