Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc107729g00001 ATGGCTGCAAATCAAGAAGATGTGAAGCTCTTGGGGGCTGTAGCAAGCCCATTTGTTTTCAGGGTGCAACTTGCTCTCAAGCTTAAGGGAGTTGAATACACATTTGTTGCACAAGATTTGAAGAACAAGAGTGAAGAGCTTCTAAAATACAACCCAATTCACAAGAAGGTGCCAGTGCTT 180 0.4278 MAANQEDVKLLGAVASPFVFRVQLALKLKGVEYTFVAQDLKNKSEELLKYNPIHKKVPVL 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc107729g00001 60 Gene3D Glutaredoxin 1 60 - -
Stsc107729g00001 60 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 60 IPR004045 -
Stsc107729g00001 60 PANTHER GST N-TERMINAL DOMAIN-CONTAINING PROTEIN 5 60 - -
Stsc107729g00001 60 Pfam Glutathione S-transferase, N-terminal domain 7 60 IPR004045 -
Stsc107729g00001 60 SUPERFAMILY Thioredoxin-like 3 60 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc107729g00001 Stsc-Chr107729 11 190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc107729g00001 1 60 Glutathione S-transferase Gene Family AT2G29460 61.667 2.25e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc107729g00001 K00799 - gmx:100527851 92.0485