Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc105g00007 ATGGCGGTCGATCGGAGGATGCCGGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTTGTCCTTGGTTGTGATGGGTCTGTGCTACTTGATGATACCATCAATTTTAAGGGGGAGAAAAATGCATTACCTAATAAGAATTCAGCAAGAGGATTTGATGTGATTGACAAAATCAAGTTTGTTTTAGAGAATGAATGTCCATACACAGTTTCATGTGCTGATATTCTTGCTATTGCAGCCCGAGAAGCTATTGTTCTTAGCTATGGACCTCGTTGGAGGGTACTCTTAGGACGTAGAGATGGAAGAAGAGCAAGCTTTTATGGCGCAAATAATGAATTGCCTTCACCAACGGATTCCATAGAAAATATTACACACAAGTTCAGGTGCAAAGGTCTCCATAGAAAGGATGTAGCAGCTCTTTCTGGTGCACACACCATAGGCGAGACACAATGCAAGTTTTTCAAGGAAAGGCTATACAACTTCAATAACACTTGTAGACCAGATCCAACACTTGATCCTACACTTCTAAAAGAGTTGCAGAACCTATGTGGAAAGGTCCCTAATTGTGGAAGCCCAAATAGTTCATTTGATGCCAATCTTACTGCCTTGGACCATTTCACTCCATTCATATTTGACAACAATTATTACACAAACGTTGAGCACAAAAGGGGGATACTTTCGTCGGATCATGCTCTAGTTGATGACCAAACCACTTCTTTCTTGGTCAAAGAATATAGTCAAAATCAGGATCTGTTTTTCAATGACTTTGTAGTTTCAATGGAGAAGATGGGACGCATTGGTGTGCTTGTAGGGCAACAAGGGGAGATAAGGAAAAACTGTAGGCGGGTGAATTATTACTAG 861 0.4111 MAVDRRMPASLLRLHFHDCFVLGCDGSVLLDDTINFKGEKNALPNKNSARGFDVIDKIKFVLENECPYTVSCADILAIAAREAIVLSYGPRWRVLLGRRDGRRASFYGANNELPSPTDSIENITHKFRCKGLHRKDVAALSGAHTIGETQCKFFKERLYNFNNTCRPDPTLDPTLLKELQNLCGKVPNCGSPNSSFDANLTALDHFTPFIFDNNYYTNVEHKRGILSSDHALVDDQTTSFLVKEYSQNQDLFFNDFVVSMEKMGRIGVLVGQQGEIRKNCRRVNYY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc105g00007 286 CDD secretory_peroxidase 1 283 IPR033905 GO:0004601|GO:0042744
Stsc105g00007 286 ProSitePatterns Peroxidases proximal heme-ligand signature. 136 146 IPR019793 -
Stsc105g00007 286 FunFam Peroxidase 114 263 - -
Stsc105g00007 286 Gene3D - 3 284 - -
Stsc105g00007 286 PANTHER PEROXIDASE 72-RELATED 3 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Haem peroxidase superfamily signature 88 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Haem peroxidase superfamily signature 70 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Haem peroxidase superfamily signature 8 22 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Haem peroxidase superfamily signature 136 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 218 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 69 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 10 30 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 135 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 88 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 50 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 258 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 PRINTS Plant peroxidase signature 202 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 ProSiteProfiles Plant heme peroxidase family profile. 1 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 Pfam Peroxidase 4 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc105g00007 286 Gene3D Peroxidase, domain 2 114 263 - -
Stsc105g00007 286 SUPERFAMILY Heme-dependent peroxidases 4 284 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc105g00007 Stsc-Chr105 65657 68655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc105g00007 4 284 Peroxidase AT5G06730 52.650 2.27e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc105g00007 K00430 - tcc:18607886 323.939