Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc105g00005 ATGCGGTGGATGCACATTTCCTTTTCCAAAGACAAAGACAGAGAAAACAATTACACTTCCTCCTCCTCCGCCTCCTCCGCTTCTTCTTCTTCTTCTTCTTCCGCCGTCGTCGAAAGCCACAAGAAAGCATGGCGGTTCCGAAGCCGGCACAAGAAGCATGCAAGCACCGGCGGAAATTCTCCTCACGGTGGTTATAATAATAAGCATTCTGACGTGGAAGAGGACGGCGCCGCCGTGGCGATCTCGGTGAACTCCCCTCCCGGCTTTCGCACCACATCCACCTCCTCATCTGCGTCGGCATCTTCCTCCTGCTCGTCTGCGAAGCCGTTACCGTTGCCGTTGCCGCAGCGTGATGTGGAATTTCGGCAACCGTCCCCTGTGGGAACCTCCAGCAGTGCTAGCTTCAATGGCTATCGATCAATGGAGGATCGCGATCGAACTGATTCTGCTCCCGATTTCAACCTTTCATCTTCCACGGGGTTCAAAATGAGGAGCGTTTTCGCTAGCAACCGGGACACAACACGAAAGGCTGAGCAGCCGGATAATCGGTCACCAAGATCTCAAGAAAACTATGGTGTAAGCCACTCGGGCAAGAGTTCTTCAAATAGTCCCTTTACAAGTCCCAAGATCAGTCCGCGTCGAGCAAGCACAGATGATTTCATTCCATATCATTATGTAGCTCCAAAAGGAAACCAATTCTGGTCTGCACCCGAGATATCTTCTTCAGAGACATCCCTGCATCCAGTCTTTGATTTATCGACATCAGGCACCGATACCTCGCCACGTCTAAGTCCACATGGAAGAGCTCAACTACTCCTTTTTAAGTGCGCAAGTGGACCTCCATCACCCTTACACACCAGCTTGATGAATGAGACTACATCAGCACGCCGAGCCGAAGGTAATTCTGTCAGTGTCCACCGTTTACCCCTGCCTCCCATGCCCAACTTACCTTCCCCAACTGCTGCAACTGGTTACTCCCAGGCTGTGGTGAAATCAGACTCGTTGCCAATGAAAAGCCAATGGAAGAAGGGGAAACTTATTGGCCGCGGCACATTTGGAAGTGTTTATGTTGGCACAAATAGAGAAACTGGAGCGTTGTGCGCGGTGAAAGAAGTAGAATTATGTCATGAGGATCCAACTTCCATAGAGTCTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATTCAAATATTGTGCAGTACTATGGTAGTGAAGTAGTTGGAGACAAGTTCAATATTTATCTGGAATATGTCCATCCTGGTTCAATTACTAAATATGTCCGCGACCATTGTGGTGCCATAACAGAATCGGTCATTAGGAATTTTACACGCCATATTCTTTCAGGGTTGGCATACTTGCATAGCAAGAAAACAATTCATAGGGACATTAAAGGGGCTAATTTGCTTGTCGATTCGGCAGGAGTAGTCAAACTTGCTGATTTTGGAATGGCCAAGCATCTTACTGGATGTGAAGCTAATCTCTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAGACTGTTGTGCAAAAAGATAACAACTCAGATCTAGCTTATGCTATCGATATCTGGAGCCTTGGCTGTACAATCATTGAAATGTTCAATGGGAAACCTCCGTGGTGTGAGTTCGAAGGAGCTGCAGCAATGTTTAAGGTTATGAGAGATACCCCGCCTATACCAGAAACATTGTCGTCTGACGGCAAAGATTTCCTGAGGTGTTGCTTTAAAAGAAATCCGGCAGAGAGACCAACTGCTGCAATGTTACTCGAACATCGATTTTTGAAGAACTCACAACTACTGGATGTTATGTCTTCCACTCAGTTGTTCAATGGAACAACAATCATGGGAATCTAG 1878 0.4696 MRWMHISFSKDKDRENNYTSSSSASSASSSSSSSAVVESHKKAWRFRSRHKKHASTGGNSPHGGYNNKHSDVEEDGAAVAISVNSPPGFRTTSTSSSASASSSCSSAKPLPLPLPQRDVEFRQPSPVGTSSSASFNGYRSMEDRDRTDSAPDFNLSSSTGFKMRSVFASNRDTTRKAEQPDNRSPRSQENYGVSHSGKSSSNSPFTSPKISPRRASTDDFIPYHYVAPKGNQFWSAPEISSSETSLHPVFDLSTSGTDTSPRLSPHGRAQLLLFKCASGPPSPLHTSLMNETTSARRAEGNSVSVHRLPLPPMPNLPSPTAATGYSQAVVKSDSLPMKSQWKKGKLIGRGTFGSVYVGTNRETGALCAVKEVELCHEDPTSIESIKQLEQEIKVLSQLKHSNIVQYYGSEVVGDKFNIYLEYVHPGSITKYVRDHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGCEANLSLKGSPYWMAPELMQTVVQKDNNSDLAYAIDIWSLGCTIIEMFNGKPPWCEFEGAAAMFKVMRDTPPIPETLSSDGKDFLRCCFKRNPAERPTAAMLLEHRFLKNSQLLDVMSSTQLFNGTTIMGI 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc105g00005 625 MobiDBLite consensus disorder prediction 151 168 - -
Stsc105g00005 625 SUPERFAMILY Protein kinase-like (PK-like) 333 613 IPR011009 -
Stsc105g00005 625 MobiDBLite consensus disorder prediction 85 109 - -
Stsc105g00005 625 MobiDBLite consensus disorder prediction 184 213 - -
Stsc105g00005 625 SMART serkin_6 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc105g00005 625 MobiDBLite consensus disorder prediction 1 214 - -
Stsc105g00005 625 FunFam Mitogen-activated protein kinase kinase kinase 5 338 624 - -
Stsc105g00005 625 Pfam Protein kinase domain 342 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc105g00005 625 MobiDBLite consensus disorder prediction 169 183 - -
Stsc105g00005 625 MobiDBLite consensus disorder prediction 123 138 - -
Stsc105g00005 625 ProSiteProfiles Protein kinase domain profile. 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc105g00005 625 MobiDBLite consensus disorder prediction 18 38 - -
Stsc105g00005 625 MobiDBLite consensus disorder prediction 1 17 - -
Stsc105g00005 625 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Stsc105g00005 625 Gene3D Transferase(Phosphotransferase) domain 1 337 619 - -
Stsc105g00005 625 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 18 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc105g00005 Stsc-Chr105 28020 32408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc105g00005 139 622 MAP Kinase Kinase Kinase AT5G66850 59.570 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc105g00005 Pkinase 6.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc105g00005 - - gmx:100790701 649.818