Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc105078g00001 ATGGTGGCAACAGGGGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTATGTTGTATTTGATAAAACAGGCACTCTAACTCAAGGGAAAGCCACTGTTACTACTGTGAAGGTGTTCACAGGAATGGAGCGTGGAGAATTTCTTACACTGGTGGCTTCTGCTGAG 198 0.4596 MVATGVGANNGVLIKGGDALERAQMVKYVVFDKTGTLTQGKATVTTVKVFTGMERGEFLTLVASAE 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc105078g00001 66 SUPERFAMILY HAD-like 18 50 IPR036412 -
Stsc105078g00001 66 ProSitePatterns E1-E2 ATPases phosphorylation site. 32 38 IPR018303 -
Stsc105078g00001 66 Gene3D - 1 61 IPR023214 -
Stsc105078g00001 66 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc105078g00001 Stsc-Chr105078 62 259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc105078g00001 1 66 Primary Pumps ATPases AT5G44790 86.364 2.42e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc105078g00001 K17686 - rvl:131313093 125.176