Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc105032g00001 ATGAGGAAAGCAACCACCAAGCAAGTTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGGCCCCATCCTACCTCACTGGTGAGTTCCCTGGTGACTATGGATGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCCAGGAACCGTGAGCTTGAAGTAATCCACTGCAGGTGGGCCATGCTTGGGGCCCTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAATGGT 264 0.572 MRKATTKQVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc105032g00001 88 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 88 IPR001344 GO:0009765|GO:0016020
Stsc105032g00001 88 Pfam Chlorophyll A-B binding protein 31 86 IPR022796 -
Stsc105032g00001 88 Gene3D Chlorophyll a/b binding protein domain 22 88 - -
Stsc105032g00001 88 SUPERFAMILY Chlorophyll a-b binding protein 14 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc105032g00001 Stsc-Chr105032 3 277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc105032g00001 1 88 Chloroplast and Mitochondria Gene Families AT2G34430 89.773 1.01e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc105032g00001 K08912 - han:110872088 187.193