Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc104209g00001 ATGTTGAAGAATCCAAAGATCCTTCTTTTGGATGAAGCAACTAGTGCTCTAGATGCTGGATCAGAGAGCATTGTTCAAGAGGCACTAGACCGGCTCATGGTCGGAAGAACAACCGTGGTTGTCGCGCATCGTCTCTCGACCATAAGAAATGTTGATACCATTGCTGTGATCCAGCAAGGGCAAGTCGTCGAGACCGGAACACACGAGGAACTCATTGCCAAGGCAGGAACCTAT 234 0.4872 MLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGTY 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc104209g00001 78 Gene3D - 1 78 IPR027417 -
Stsc104209g00001 78 PANTHER ABC TRANSPORTER B FAMILY 1 78 IPR039421 -
Stsc104209g00001 78 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 78 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc104209g00001 Stsc-Chr104209 3 293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc104209g00001 1 78 Calmodulin-binding Proteins AT2G36910 68.750 1.38e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc104209g00001 K05658 - gmx:100797124 149.058