Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc103g00011 ATGTTATATATATCTGAGACTTCTTTAATGATGCCAGGCTTTCCTGTTGCAACTTGTGAAACTTCATATTCTAGAAGCACAAATCAAATAAGCTATCCTGATGCTCATGGGCATTTATCTGCTGAAGAGGAGCTTGCTGCAGAAGAGAGTTTCGCAGTTTATTGCAAGCCTGTAGAATTCTACAATATTCTTCGGCGACGTGCTTTACGAAATCCTACATTTCTTCAGAGATGTTTGGACTATAGGATAAAGGCTAGACAAAAGAAGAGGATACAATTGACAGTTTTTCTGAGCGATACAGATGAAACTCAAGTATTGTTTCCCTTGTATATTTGTCTAGCAAGGCTGGCTTCTAAGGATGAGGATGCCGAGAAGTACTCTGCTGTATATCGCATTGGTCGGGTTTTCATCTTTCGAGATCCTTTTGAAGTTGATGGTGATACTCAACACAAAGCGAACTTTTTGCTCCCTGACATTCATAGGCTAGCTCTGACAGCCAAATCTGGGTCACTCGTTCTCTTGTTCTTCACTGCTGTGGAGGACCCAAATTCCTCATCTGGGGTCAATGCAAGCCTGGTGCCTTTGGATCCAAGTTCATCTGAATCAAGAGATGGAGAGTACTGCTTATGTGGGAAAGTATCTCTCGAAAAAATTTTTCAGTCATGGGATGAATCTCCAAATTTAAGATTGGGACTTCAAGCTGAGGCTGTGTCAACGATTGATCTGCATCCATGTTTTCTAAAGTATGGTGTTCGAGATAAGGAGCAGAGCATCTCAGTTCAAGTAACAAATAATTTTGAGAATGGGTTTCCAAAGAGTACATCAAACCATTTGCAAATAAGAATGTATGCCCAACAGTGTGGGGCTAAGGAGAAATCTTCCCATTATACAAACATATCTGCACTAGCATTGCCCTCATTATCTCGTATCATCCGGTTGAAGGAGGGCAACGTAAAGTTTAATTACAGGTATTACTATGATAAATTGCAGAGAACGGAAGTCACTGAAGATTTCTCCTGTCCGTTATGTTTGGTTAGATGTGCAAGCTACAAGGGCATTAAATGTCACTTGCTCGCTTCACATGATCTTCTCAACTTTGAATTTTCGGCATGGGAGGACTGCCCGACAATAAACGTGTCTGTGAAAAATGATAACTGGAAATCTGAGATTTTTGCAAATATTGTTGATCCCAAGTTGCACACTATTAACTTTTGTGCCAAACCACTTAAGAGAATACGGCCAGAGGATGAAACTTCTGAAAAAGCAAAGGCTGCAGATCCACTTGTCTTAGAATCTGAAATTCCAACTGGAGAGGGTGATCTTTTGGAGAAAGCTGATGGCATTGCAGGGGTTTCAAACGGAATTGTAGAATTGCAACCTGATCAAGATTGTGTCCCACCTGAACTACCGACAGATGAGTATGGTCTTGCGAATCCTGCTGTGTTACTGGATGCCACAACAGGAAAGTCAACAATTCAGCATTATAACATTGACCCACAAATCCTTTCCCAGTTGAGCAAGCGAAAGTTCTATCACTCTCACAAATACCAGCCAATGGAACTTGAAGAAGTTCTATCAGAAGAAGATAGTGAGGATGAAGTTGACGACGAAGTAGCAAGTTTTGAAGATCGAAGGATGCTTGGTAATTTTGTCGACGTGACCGATGCTGAGAAAAAATTCATGCATATGTGGAACTCGTTTGTTCGAAAGCAACGGGTGCTGGCAGATGGTCATATTCCATGGGCATGTGAGGCTTTTATAAAAGTTCATGGCTTTGAGCTTCTGGAGTGCCCCATATTGCCTTGGTGTTGGAGACTGTTTTCTATCAAATTATGGAATCATGGTCTTCTAGATGCAAGGACTATCAATTTATGCAGCCTTATCCTTCAACAGTATCAGAGGGAGAAATCAGCCCCAAATAGTTAA 1926 0.4117 MLYISETSLMMPGFPVATCETSYSRSTNQISYPDAHGHLSAEEELAAEESFAVYCKPVEFYNILRRRALRNPTFLQRCLDYRIKARQKKRIQLTVFLSDTDETQVLFPLYICLARLASKDEDAEKYSAVYRIGRVFIFRDPFEVDGDTQHKANFLLPDIHRLALTAKSGSLVLLFFTAVEDPNSSSGVNASLVPLDPSSSESRDGEYCLCGKVSLEKIFQSWDESPNLRLGLQAEAVSTIDLHPCFLKYGVRDKEQSISVQVTNNFENGFPKSTSNHLQIRMYAQQCGAKEKSSHYTNISALALPSLSRIIRLKEGNVKFNYRYYYDKLQRTEVTEDFSCPLCLVRCASYKGIKCHLLASHDLLNFEFSAWEDCPTINVSVKNDNWKSEIFANIVDPKLHTINFCAKPLKRIRPEDETSEKAKAADPLVLESEIPTGEGDLLEKADGIAGVSNGIVELQPDQDCVPPELPTDEYGLANPAVLLDATTGKSTIQHYNIDPQILSQLSKRKFYHSHKYQPMELEEVLSEEDSEDEVDDEVASFEDRRMLGNFVDVTDAEKKFMHMWNSFVRKQRVLADGHIPWACEAFIKVHGFELLECPILPWCWRLFSIKLWNHGLLDARTINLCSLILQQYQREKSAPNS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc103g00011 641 PANTHER POLYCOMB GROUP PROTEIN 38 639 - -
Stsc103g00011 641 CDD ZnB-Zn_EMF2-like 312 386 - -
Stsc103g00011 641 CDD VEFS-box_EMF2-like 507 632 - -
Stsc103g00011 641 Pfam VEFS-Box of polycomb protein 499 626 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc103g00011 Stsc-Chr103 97043 106798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc103g00011 11 633 C2H2 Transcription Factor Family AT5G51230 47.699 6.71e-178 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc103g00011 - - adu:107473598 1137.87