Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc103790g00001 ATGCTTTTTGCAATGGACTTCGGAGTTTCAGCGGTGTTTTCATTTGCTGTGAAGACTGCATTTGAGCTTGGAATCTTTGACATAATAGCCAAAGCTGGTGGTGAACATGCAAAGCTCTCAGCTCAAGACATTGCTTCACAGATTGGTGGCAAGAACCCTAATGCACCATCAATGGTGGATCGTCTTCTTAGGCTTCTTGCAAGTCATTCTTTCTTGTCTT 220 0.4318 MLFAMDFGVSAVFSFAVKTAFELGIFDIIAKAGGEHAKLSAQDIASQIGGKNPNAPSMVDRLLRLLASHSFLS 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc103790g00001 73 Gene3D - 1 73 IPR036388 -
Stsc103790g00001 73 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 5 73 IPR016461 GO:0008168
Stsc103790g00001 73 PANTHER O-METHYLTRANSFERASE 7 72 IPR016461 GO:0008168
Stsc103790g00001 73 SUPERFAMILY "Winged helix" DNA-binding domain 2 72 IPR036390 -
Stsc103790g00001 73 Pfam Dimerisation domain 16 67 IPR012967 GO:0046983
Stsc103790g00001 73 FunFam Caffeic acid 3-O-methyltransferase 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc103790g00001 Stsc-Chr103790 1 313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc103790g00001 2 73 Monolignol Biosynthesis Gene Families AT5G54160 45.833 6.54e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc103790g00001 K13066 - adu:107473077 114.39