Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1032g00002 ATGGGCACGCTTCGCAAAAAAGCGTCTCTTGCAGTATTCTTTCTTCTTTTTGTTGCTCTCTGCCATGGTGTTACTTCGCCAAACAAGAAGACCACATACATAGTCCACGTGGCGAAATATCAGATGCCGGAGAGCTTCGAGCACCACGGCGAGTGGTACGCTTCCTCTCTCAAATCCGTTTCTGAAAAGGCGGAAATGCTGTACACTTACGAGAACGCCATCCATGGCTACTCCACCAGGCTAACGGAGGAGGAAGCTCGTTTGCTGGAGGCACAGGACGGTGTCCTTGCCGTTCTTCCGGAAACAAAGTACGAACTTCACACGACTAGGACACCGTTGTTCTTGGGCCTTGACAAGAGCTCAGACCTTTTCCCGACGTCAGATTCCTCCAGTGACGTCATCATCGGAGTCCTCGACACCGGGGTTTGGCCTGAGAGCAAGAGCTTCGACGACACCGGGCTCGGACCCGTTCCCAGCACGTGGAAAGGCACGTGCGAAACTGGAACTAACTTTACAGCTTCTAACTGCAATAGAAAACTCATCGGAGCCAGATTCTTCGCCAAAGGCTACGAAGCCATGTTAGGTCCAATCGATGTGACTAAAGAATCTAAGTCCCCACGCGACGACGACGGCCATGGGACCCACACCTCTAGTACTGCCGCGGGCTCTGTTGTCACGGGCGCCGGCCTCTTTGGCTACGCACAGGGGACGGCGCGTGGGATGGCCACGCGCGCTAGAATCGCTGCATACAAAGTGTGCTGGATCGGGGGGTGTTTTAGCTCTGATATTCTCGCCGCCATAGATAGAGCCATACATGATAACGTTAACGTTCTTTCTATGTCCCTTGGGGGTGGAAGCTCTGATTATTACAGAGACAGTGTTGCTATTGGATCCTTCGCTGCAATGGAGAAAGGGATTCTTGTTTCTTGTTCTGCCGGAAACGCTGGTCCCAGTCCTTCGAGTCTATCCAATGTGGCACCATGGATCACTACTGTGGGCGCGGGTACACTGGATCGTGACTTCCCGGCGTACGTTAGCCTCGGTAACGGGCTTAACTTTTCTGGTGTTTCCTTGTATCGAGGTAACGCTTTACCTGATTCTCCTTTACCGTTTGTTTACGCTGGCAATGCAAGCAACGCCACGAATGGAAACTTGTGCATGATGGGAACACTGTTGCCGGAGAAAGTCGCCGGGAAAATCGTGCTGTGTGAAAGAGGAGTTAGCGCTAGGGTTCAAAAAGGTGCTGTGGTGAAGGCTGCGGGAGGTTTGGGCATGGTGCTTGCTAACACCGCTGCCAACGGCGAAGAGCTTGTAGCCGACGCCCACCTACTCCCGGCGACAGCGATAGGTGAGAAAGCCGGCGATGCTGTGAAGAAATATCTCTTCACTGACGCTAGACCGACGGTGAAGATCGATTTTGAAGGGACTAAGGTGGGGATCCAGCCGTCGCCGGTTGTGGCGGCGTTCAGTTCCCGCGGCCCCAACAGTTTAACGCAACAGATCTTGAAGCCTGATCTGATCGCACCAGGTGTCAACATCTTAGCGGGTTGGTCCAGGGCAATGGGTCCCACGGGTTTAGCCGTTGATAACAGGCGCGTGGACTTCAACATCATCTCCGGCACCTCAATGTCGTGCCCTCACGTGAGTGGCTTAGCTGCGCTGATCAAATCGGCTCATCCTGAATGGAGCCCAGCCGCAATTCGGTCGGCTCTCATGACAACGGCTTACACGGCTTACAAGAACGGCCAAAAATTACAAGACAGCGCCACCGGCAAGCCATCTACACCGTTCGATCACGGAGCTGGACACGTGGACCCTGTGGCAGCCCTTAAACCAGGACTCGTCTATGATCTAACTCCTGAAGATTACCTAGGCTTCTTATGTGCTTTGAACTACACCGAAGGTGAGATCCAAAGCGTTGCAAGAAGAAGTTTCCAGTGCGACGCGGGAAAGACTTACAGTGTGACCGATCTCAATTACCCTTCGTTTGGTGTGGTGTTCGAGTCATCAACGGCTGTGGTGAAGCACACAAGGTTCCTCACTAACGTGGGACCCGATGCGAGCTTCAAGGCTTCCGTGACGTCAGATTCCCCGTCGGTGAAGGTATCGGTTGTGCCGCAAGTGCTGAGTTTCAAAGAGGGTGAGAAAAAAACGTATACAGTAACGTTCACTTCTTCTGGTGAAGCCCCACAGGGTGGTAATGCCTTTGGACGGTTAGAATGGACTGATGGGAAGACTGTGGTAGGAAGCCCAATCTCAATTACGTGGCTTTAA 2274 0.5299 MGTLRKKASLAVFFLLFVALCHGVTSPNKKTTYIVHVAKYQMPESFEHHGEWYASSLKSVSEKAEMLYTYENAIHGYSTRLTEEEARLLEAQDGVLAVLPETKYELHTTRTPLFLGLDKSSDLFPTSDSSSDVIIGVLDTGVWPESKSFDDTGLGPVPSTWKGTCETGTNFTASNCNRKLIGARFFAKGYEAMLGPIDVTKESKSPRDDDGHGTHTSSTAAGSVVTGAGLFGYAQGTARGMATRARIAAYKVCWIGGCFSSDILAAIDRAIHDNVNVLSMSLGGGSSDYYRDSVAIGSFAAMEKGILVSCSAGNAGPSPSSLSNVAPWITTVGAGTLDRDFPAYVSLGNGLNFSGVSLYRGNALPDSPLPFVYAGNASNATNGNLCMMGTLLPEKVAGKIVLCERGVSARVQKGAVVKAAGGLGMVLANTAANGEELVADAHLLPATAIGEKAGDAVKKYLFTDARPTVKIDFEGTKVGIQPSPVVAAFSSRGPNSLTQQILKPDLIAPGVNILAGWSRAMGPTGLAVDNRRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAIRSALMTTAYTAYKNGQKLQDSATGKPSTPFDHGAGHVDPVAALKPGLVYDLTPEDYLGFLCALNYTEGEIQSVARRSFQCDAGKTYSVTDLNYPSFGVVFESSTAVVKHTRFLTNVGPDASFKASVTSDSPSVKVSVVPQVLSFKEGEKKTYTVTFTSSGEAPQGGNAFGRLEWTDGKTVVGSPISITWL 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1032g00002 757 MobiDBLite consensus disorder prediction 200 220 - -
Stsc1032g00002 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 107 IPR037045 -
Stsc1032g00002 757 CDD PA_subtilisin_like 344 471 - -
Stsc1032g00002 757 FunFam subtilisin-like protease SBT1.5 338 478 - -
Stsc1032g00002 757 Pfam Subtilase family 130 586 IPR000209 GO:0006508|GO:0008236
Stsc1032g00002 757 FunFam Subtilisin-like protease SBT1.9 21 107 - -
Stsc1032g00002 757 Gene3D - 627 756 - -
Stsc1032g00002 757 FunFam Subtilisin-like protease SBT1.5 132 349 - -
Stsc1032g00002 757 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Stsc1032g00002 757 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Stsc1032g00002 757 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Stsc1032g00002 757 CDD Peptidases_S8_3 104 576 IPR034197 -
Stsc1032g00002 757 Gene3D Peptidase S8/S53 domain 132 623 IPR036852 GO:0004252|GO:0006508
Stsc1032g00002 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Stsc1032g00002 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 753 IPR045051 -
Stsc1032g00002 757 SUPERFAMILY Subtilisin-like 106 614 IPR036852 GO:0004252|GO:0006508
Stsc1032g00002 757 Pfam PA domain 378 456 IPR003137 -
Stsc1032g00002 757 Pfam Peptidase inhibitor I9 32 107 IPR010259 -
Stsc1032g00002 757 ProSiteProfiles Serine proteases, subtilase domain profile. 103 610 - -
Stsc1032g00002 757 Gene3D - 338 479 - -
Stsc1032g00002 757 Pfam Fibronectin type-III domain 657 754 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1032g00002 Stsc-Chr1032 15327 18415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1032g00002 8 756 Subtilisin-like Serine Gene Family AT5G67360 72.703 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1032g00002 - - gmx:100776647 1218.37