Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc102g00027 ATGGATAATTTCTGTTGCTTCAACTCTGTCTCTCAGGTGGTTGGTGGTCGTTCTTCGGGTAGCTCCGGCAAGGGAAGGAGCCCTCAGTATGCAGTCAAGTATGGTTTCAGCCTAGTTAAAGGGAAAGCGAATCACCCGATGGAGGACTATCATGTGGCGAAATTTGTCCAGTCGAGGGGGCAAGAGCTAGGACTTTTCGCTATCTATGATNNNNNNNNNNGAGACACTGTTCCAGCATATTTACAAAAGCATCTGCTTTCTAATATCTTGAAGGAAGCAGACTTCTGGGATGATCCAAACAGTTCCATCATTAAGGCTTATGAGACGACGGATCAGGCCATTCTTTCTCACAACCCTGATCTAGGACGAGGCGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAGAAATTGTGGATAGCGAATGTCGGAGATTCAAGAGCAGTTCTGTCACGAGGAGGGCAGGCAATACAGATGACGGTAGATCATGAGCCCAATACCGAAAGGGGCATCATCGAGAACAAAGGCGGATTTGTCTCAAACATGCCAGGTGATGTTGCAAGAGTGAACGGGCAGCTTGCGGTGTCTCGAGCATTCGGAGACAGAAACCTCAAATCGCACTTGCGATCCGATCCGGACGTACAACATTGCGACATTGACCAAGATACCGAGATTTTGATTCTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAAGCAGTGGATTTGGCGAAAAAGATCAAAGATCCTCAAAAGGCAGCAAAACAGCTAGTTGCTGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGTGA 846 0.4563 MDNFCCFNSVSQVVGGRSSGSSGKGRSPQYAVKYGFSLVKGKANHPMEDYHVAKFVQSRGQELGLFAIYDXXXXDTVPAYLQKHLLSNILKEADFWDDPNSSIIKAYETTDQAILSHNPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRGGQAIQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQHCDIDQDTEILILASDGLWKVMANQEAVDLAKKIKDPQKAAKQLVAEALNRDSKDDISCIVVRFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc102g00027 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Stsc102g00027 281 CDD PP2Cc 32 280 IPR001932 -
Stsc102g00027 281 Gene3D - 29 281 IPR036457 -
Stsc102g00027 281 FunFam Probable protein phosphatase 2C 39 24 281 - -
Stsc102g00027 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Stsc102g00027 281 PANTHER PROTEIN PHOSPHATASE 26 280 IPR015655 GO:0004722|GO:0006470
Stsc102g00027 281 SMART PP2C_4 29 278 IPR001932 -
Stsc102g00027 281 SUPERFAMILY PP2C-like 28 281 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc102g00027 Stsc-Chr102 106245 109312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc102g00027 1 281 PP2C-type Phosphatase Gene Family AT1G22280 68.990 1.26e-143 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc102g00027 K17506 - gmx:100787659 454.907