Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc102g00017 ATGAAAGAAGTTCAATGGGTGAGTTCCTCTTGCACTAGCAAGTTCTTCATGTTTGTGTTGCTACTTACTCTTATTAATAATGGAAGCTGCAGTGGTGACATTGTCAAAACCTTACCTGGTTTTCAAGGTCCCTTGCCTTTTATGCTTGAAACCGGATATATAGGAGTGGAGTACACAGAACTGTTCTACTATTTTGTTGAATCAACAGGAAAACCCCAAATTGACCCTCTTATCCTTTACTTGATTGGAGGTCCTGGTTGTTCTGGTTTGAATGGAGTACTCTACCAAACTGGTCCTTTGGCTTTCAATGTCACAGACTATTCTGGAGGTTTACCACAGTTAATTCTAAGGGGACACACTTGGACAAAGTCAGCTAGTATCATATACCCTGATGTTCCTGTTGGTACTGGATACTCTTATGCTACCACCCAACAAGGTTACATGTTGTCTGACACTATAACAATTAGGCACATCATGAAATTCTTGAGAAAGTGGTTGATTGAACACCCTAAATTCATCACCAATAGATTCTACATTGCCACAGATTCATACAGTGGAGTGTTTGCTCCAATTCTTGCACAACAAATATTAGATGATAATGCTGCTGGAATTTTGCCAAATATAGAGTTAATAGGATACATAAGTGGTTCCCCACACTGTAATACACCATCAGAGATAAATGCAAAAGTACCTCTAGCTCACAATTTGGCACTCATATCAGACAAACTTTATGAGACAGCCAATGAAAACTGCAATGGTTGGTACTATGATGTAGATCCCTCAGATGCAACATGTTGGGAATCACTTGAACCAATTCATGAGTGCCTTACTGATATATATGAATCCAATGTCGTAGAACCTGACTGTGCATTAGTATCACCAAAACCAGGTGATAATGAACTTTCCCGAAGAGCTCTCATGGAAGCCGAACAAGGCCAACGTTTTCTTCCAAAGTCACTAAGACAAAAATCTTCTGACCAATGGCACTGCAAGATTTTTGCTTATCTACTGTCACACATATGGGCAAATGATAAGAGCGTTCAGGAGGCTCTCCATGTTCGTGAGGGAACATTTGATAGATGGACAAGATGCAACCTATCCTTGATTGATGAATACATTAAGGATGTTAAAAGTGCATTTCCTTACCACAAGAATCTTACTACCACCGGCTTACAAATATTACTTTATACTGGGGATCATGACCTAGTTGTGCCTCATATATCAACTGAAGGTTGGGTGAGATCCCTGAATATTACAGTTGATGATTCTTGGGCACCTTGGTTTGTTGATGCTCAAGTTGCAGGGTACAAGGTCATATATTCTAATACAGGATATCGTTTAACCTATGCAACCCTTAAGGGATCAGGTCACTCACCTACAGAATACTATAATGAGCGATGTTTTCAGATGTTTGAAAGGTGGATTCATTTCTATCCCGTGTGA 1443 0.3971 MKEVQWVSSSCTSKFFMFVLLLTLINNGSCSGDIVKTLPGFQGPLPFMLETGYIGVEYTELFYYFVESTGKPQIDPLILYLIGGPGCSGLNGVLYQTGPLAFNVTDYSGGLPQLILRGHTWTKSASIIYPDVPVGTGYSYATTQQGYMLSDTITIRHIMKFLRKWLIEHPKFITNRFYIATDSYSGVFAPILAQQILDDNAAGILPNIELIGYISGSPHCNTPSEINAKVPLAHNLALISDKLYETANENCNGWYYDVDPSDATCWESLEPIHECLTDIYESNVVEPDCALVSPKPGDNELSRRALMEAEQGQRFLPKSLRQKSSDQWHCKIFAYLLSHIWANDKSVQEALHVREGTFDRWTRCNLSLIDEYIKDVKSAFPYHKNLTTTGLQILLYTGDHDLVVPHISTEGWVRSLNITVDDSWAPWFVDAQVAGYKVIYSNTGYRLTYATLKGSGHSPTEYYNERCFQMFERWIHFYPV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc102g00017 480 Gene3D - 334 478 - -
Stsc102g00017 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Stsc102g00017 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Stsc102g00017 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Stsc102g00017 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Stsc102g00017 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 460 IPR001563 GO:0004185|GO:0006508
Stsc102g00017 480 SUPERFAMILY alpha/beta-Hydrolases 35 476 IPR029058 -
Stsc102g00017 480 FunFam Serine carboxypeptidase-like 19 29 295 - -
Stsc102g00017 480 FunFam Carboxypeptidase 329 480 - -
Stsc102g00017 480 Gene3D alpha/beta hydrolase 29 294 IPR029058 -
Stsc102g00017 480 Pfam Serine carboxypeptidase 39 476 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc102g00017 Stsc-Chr102 80889 83547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc102g00017 31 56 Calmodulin-binding Proteins AT2G22960 80.769 4.47e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc102g00017 K16296 - zju:107404767 542.732