Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc102g00001 ATGGTTAAGGCTCATAAGCCTTGGCCTTGCCCACAGCATATGGCTTGGTCATCACCTTGTTTGAATAGCTCCTGCACATTGCCAGAACCAAACTTATGTGGTCCTTCAGCATATCTGAATCCTAGCACATTCAGTGTATTTCCTGGATTTGCAGCTCCTGCTGCCGCATGTCTGAAGGCTGAGCCCACCAATGAAGTGCAGGGGTTACATCAGCATCTTCAGTCATTGCCAACTTTGAAACAAATGCATACTGAAGAGGCTATGCAATTGCAAAATGAAAATTCTGCATCTTTGCAGAAGAAGTTACTTATTTTCGACCAATCTGGTAATAAGACAAGGTTGTTTTATAGCTCTGTCTTGCCTATTGTCCAGAGTCCAGTTGTTAATGCTACACAATATGTATACAAGGATGAAAAGGCAGCGAATTTGGGTCAAAACAGTTCCACAGAAGAGTCTGATAAGGATCATATAGTTAATGAAGGAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCCTTGCTTTATTCCGATGATTCTGATTTCGGTGGTGATGACGACGACGAAGATGATGGTGATGAGGTAACAAGTACAGGCCACTCTCCATTGATTACTAAAAGGACTTTTGTGATGCAAGAGCAGTATGAGGATTCAAAGGAGGAGGTTGCTAGCTCTGGTTTTCCAAACAAAAGGTGGAAGTCAAGAAATGGCGAGTACTATAGATCACCAATGCCTGCAGGCAGTGCTGGTTCAGCAAGACAAAATGATACCTATGACTATGAGTATGCCAGCGATGCCGAATCGAAATATTCCAGTGGCTGCGTGTATTCTTCAGGTGCTGAGCAAACTAAAGACAATAGTTCAATGGCGGATGATATTCAATTGCAAAGGGATAAAATCCGGGAATCATTGAAAGTTCTTGAGAACTTAGTTCCTGGTGCAAAGGGAAAGAATCCATTGTTAGTCATTGATGGAACAATTGAGTACTTGAAATCTTTGATGACCGAAACAAGTACTTTCGAAGAAGATAACATCACCGACGGCTCGTTGCCGCCATAG 1059 0.4221 MVKAHKPWPCPQHMAWSSPCLNSSCTLPEPNLCGPSAYLNPSTFSVFPGFAAPAAACLKAEPTNEVQGLHQHLQSLPTLKQMHTEEAMQLQNENSASLQKKLLIFDQSGNKTRLFYSSVLPIVQSPVVNATQYVYKDEKAANLGQNSSTEESDKDHIVNEGSEMHEDTEEINALLYSDDSDFGGDDDDEDDGDEVTSTGHSPLITKRTFVMQEQYEDSKEEVASSGFPNKRWKSRNGEYYRSPMPAGSAGSARQNDTYDYEYASDAESKYSSGCVYSSGAEQTKDNSSMADDIQLQRDKIRESLKVLENLVPGAKGKNPLLVIDGTIEYLKSLMTETSTFEEDNITDGSLPP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc102g00001 352 Coils Coil 290 310 - -
Stsc102g00001 352 MobiDBLite consensus disorder prediction 267 291 - -
Stsc102g00001 352 MobiDBLite consensus disorder prediction 180 194 - -
Stsc102g00001 352 MobiDBLite consensus disorder prediction 177 254 - -
Stsc102g00001 352 PANTHER TRANSCRIPTION FACTOR BHLH145 8 341 IPR037546 -
Stsc102g00001 352 MobiDBLite consensus disorder prediction 270 290 - -
Stsc102g00001 352 MobiDBLite consensus disorder prediction 212 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc102g00001 Stsc-Chr102 2920 4830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc102g00001 97 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 35.458 8.61e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc102g00001 - - gmx:100778385 349.747