Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1028g00002 ATGGAGTCCCCAAGCAAGAGCTCTCTCGAGATGGAGACGGCAATAATAACATCAACAGAGAGACCCACTCCCATCTGGAAGATCATTTTAGTTGCCTCCGTAGCCGCTGGCATTCAGTTTGGCTGGGCCCTACAGTTATCCCTCCTCACACCATACGTCCAACTATTGGGGGTCCCACATATGTGGTCCTCCTTCATTTGGCTCTGTGGGCCCATCTCCGGGATGGTTGTCCAGCCCATCGTGGGATACTACAGCGATCGTTGCAACTCAAGACTCGGCCGCCGTCGCCCCTTTATCATCGCCGGAGCCCTTTCCGTTATCATTGCCGTCTTCCTCATCGGATTTGCTGCTGACCTTGGTCGCTCCTTCGGTGATGACATCACCAAGAAAACTCGCCCTCAAGCTGTTGCCGTCTTCGTCATTGGCTTTTGGGTCCTAGACGTCGCCAACAACATGCTCCAAGGACCTTGCCGCGCCTTCTTGGGGGATCTCTCCGCCGGGAACGACGGCACGATCCGAATGGCCAATGCCTTCTTCTCATTCTTCATGGCCATGGGTAACATCCTCGGCTACGCCGCAGGTTCATATGAAGGCCTGCACAGAGCCTTCCCCTTCACGCGTACGGACGCATGTGACATCTTCTGCGCTAACCTCAAGAGCTGCTTCTTCATCTCCATCATTCTCCTCCTTATCGTCACTTTCCTCGCCATGTTCTTCGTTCATGACGTTCCCCTCTCAGACATCAAGAAAATGGACGACGACATTGAATCAAATGAGAACACTTCTGCTTCGGCAGGATGCTTCGGAGAGATCGTGGGGGCGTTGAAGCAGCTGAAGAAGCCAATGTGGATCTTGATGCTTGTAACAGCCATCAACTGGATTGGTTGGTTCCCATTCTTCTTGTTCAACACCGACTGGATGGGGAAGGAGGTGTACGGTGGTAATGTGGGTGAAGAGGCCTATGATAAGGGTGTCCGCGCTGGTTCGTTGGGTCTGATGATAAACGCAGTCGTTTTGGCAGTTATGTCATTAGCGGTTGAACCGGCTAGCAAAGTGATGGGTGGAGCAAAGAACCTTTGGGGTATTGTTAACTTCATCCTTGCCGGTGGCTTGCTTTCTACTATTTACATCACCAAGGTCGCCGAGTTTGACCGCAAACTCGCCGGCCATTATGTTCCACCAGCTACTGGCGTAAGGGCTGGAGCCTTGATTTTCTTCGCCGTCATCGGTATTCCACTTGCGATCAATTTCAGCGTTCCATTTGCTCTAGCATCCGTCTACTCAAGTACTAGTGGGGCAGGACAAGGTTTGTCTCTTGGGGTTCTCAATCTTGCCATTGTGATTCCACAGATGATAGTGTCAACAGTGAGTGGACAAGTGGATGCCTGGTTCGGCGGAGGAAACTTGCCTGCATTTGTGATGGGTGCAATAGCAGCTGCTATTAGTGGTGCAATGGCGCTTGTCTTGCTGCCGTCAATAAAGAAATCAGATGAAGCCAAAGCTTCTATGGTCGTCGGTGGTGGACACTGA 1530 0.5183 MESPSKSSLEMETAIITSTERPTPIWKIILVASVAAGIQFGWALQLSLLTPYVQLLGVPHMWSSFIWLCGPISGMVVQPIVGYYSDRCNSRLGRRRPFIIAGALSVIIAVFLIGFAADLGRSFGDDITKKTRPQAVAVFVIGFWVLDVANNMLQGPCRAFLGDLSAGNDGTIRMANAFFSFFMAMGNILGYAAGSYEGLHRAFPFTRTDACDIFCANLKSCFFISIILLLIVTFLAMFFVHDVPLSDIKKMDDDIESNENTSASAGCFGEIVGALKQLKKPMWILMLVTAINWIGWFPFFLFNTDWMGKEVYGGNVGEEAYDKGVRAGSLGLMINAVVLAVMSLAVEPASKVMGGAKNLWGIVNFILAGGLLSTIYITKVAEFDRKLAGHYVPPATGVRAGALIFFAVIGIPLAINFSVPFALASVYSSTSGAGQGLSLGVLNLAIVIPQMIVSTVSGQVDAWFGGGNLPAFVMGAIAAAISGAMALVLLPSIKKSDEAKASMVVGGGH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1028g00002 509 Gene3D MFS general substrate transporter like domains 22 489 IPR036259 -
Stsc1028g00002 509 SUPERFAMILY MFS general substrate transporter 28 495 IPR036259 -
Stsc1028g00002 509 FunFam Sucrose transporter SUC2 26 247 - -
Stsc1028g00002 509 NCBIfam sucrose/proton symporter 24 494 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc1028g00002 509 PANTHER SUGAR TRANSPORTER 24 489 - -
Stsc1028g00002 509 CDD MFS_SLC45_SUC 28 474 - -
Stsc1028g00002 509 Pfam MFS/sugar transport protein 40 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1028g00002 Stsc-Chr1028 3950 5778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1028g00002 2 492 Sucrose Transporter Gene Family AT1G71890 61.323 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1028g00002 K15378 - gmx:100782007 674.47