Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1028g00001 ATGGCCTCCTCAAACAAAGACAAAACCATTAATGGTGGTAGTGGCGCCACCAATTCCCTTCACGTGGAATCCGGGTCGCCACCGCAGACAAGCCCACTCTGGAAGCTCATAGCGGTGGCCTCCATCGCCGCCGGAATCCAGTTTGGCTGGGCTCTACAGCTCTCACTCCTAACACCCTACAGTCAGCTTCTCGGAGTACCACACACATGGTCCTCTTTCATCTGGCTCTGCGGCCCCATTTCCGGCATGGTTGTCCAGCCCATCGTCGGTTACTACAGCGACCGCTGTACCTCCAAACTCGGCCGCCGCCGTCCCTTCATCCTCGGCGGTGCGGTTGCTGTCGCCATAGCTGTTTTCTTCATTGGCTTCGCCGCCGACATCGGCCACGCCTTTGGAGACGACCTCTCCAAGAAAACACGGCCGCGCGCCGTCGCGATCTTCGTGATCGGGTTCTGGATCTTGGACGTGGCGAACAACATGCTCCAGGGCCCATGCCGAGCGTTCCTGGGTGACCTGGCCGCCGGCGACGAAAAGAGAACTCGACTGGGAAACGCGTTCTTCTCATTCTTCATGGCAGTGGGAAGCGTGCTGGGTTACGGCGCGGGTTCGTATGACAAAATCCACAGATGGTTCCCATTCACAGAAACAAAAGCGTGTGACAGATTCTGCGCAAACCTGAAAACGTGCTTCTTCTTCTCGATCCTGCTTCTGCTGTTCTTGACGGGTGTGGCTCTGTTCTACGTTAAGGACGAGCAAGTAACACGTGAGAAGTCAGGTGACGGAGAGGAGGACGAGAGATCCGCAGCAGTGGCATGCTTCGGAGATATGTTAGGGGCTCTCAAGGGGCTCAAGAAGCCCATGTGGTTGCTCATGGCGGTTACAGCAATAAACTGGTCAGCGTGGTTCTCATACTTTCTGTTCAACACTGATTGGATGGGCAAGGAGGTGTACGGTGGGAAGGTTGGGGAGGAGGCGTACAGTAGAGGTGTGGAGAAGGGAGCAATGGGTCTTTTGATCAACTCCGTGGTTCTAGGTGCTATGTCTCTGGCTGTGGAGCCCATTGGACGTGCGGTTGGTGGCGCCAAGAACCTTTGGGGATTTGTCAATTTTATCCTCGCCGGTGGGTTGGGAATGACCCTTTACATCTCTAAGGTAGCTAAGCACGACCGCCTTATTAACCCCCGCTTCATTGGTCATCCCTCCGCCGGCGTCCAGGCTGGAGCCTTGAGCTTCTTCGCCGTTCTCGGCATTCCGCTTGCGATAACGTTCAGTGTCCCGTTTGCACTAGCATCCATCTACTCAAGCGACACTGGTGCAGGACAAGGTTTGTCTCTTGGAGTTCTCAATCTTGCCATTGTGATTCCACAAATGTTAGTGGCAGCACTGAGCGGGCCATGGGACAATTTATTTGGCGGTGGGAACTTGCCGGCCTTCGTGGTAGGTGCGGTGGCGGCCGCCCTCAGTGGCATAATGGCAATTTTCTTGCTGCCTTCTACCAAGCAATCAGAAGCGGCTAAAGCTCCTCTCGCCATCGGTGGATTCCATTAG 1548 0.5536 MASSNKDKTINGGSGATNSLHVESGSPPQTSPLWKLIAVASIAAGIQFGWALQLSLLTPYSQLLGVPHTWSSFIWLCGPISGMVVQPIVGYYSDRCTSKLGRRRPFILGGAVAVAIAVFFIGFAADIGHAFGDDLSKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDEKRTRLGNAFFSFFMAVGSVLGYGAGSYDKIHRWFPFTETKACDRFCANLKTCFFFSILLLLFLTGVALFYVKDEQVTREKSGDGEEDERSAAVACFGDMLGALKGLKKPMWLLMAVTAINWSAWFSYFLFNTDWMGKEVYGGKVGEEAYSRGVEKGAMGLLINSVVLGAMSLAVEPIGRAVGGAKNLWGFVNFILAGGLGMTLYISKVAKHDRLINPRFIGHPSAGVQAGALSFFAVLGIPLAITFSVPFALASIYSSDTGAGQGLSLGVLNLAIVIPQMLVAALSGPWDNLFGGGNLPAFVVGAVAAALSGIMAIFLLPSTKQSEAAKAPLAIGGFH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1028g00001 515 Gene3D MFS general substrate transporter like domains 31 496 IPR036259 -
Stsc1028g00001 515 PANTHER SUGAR TRANSPORTER 31 495 - -
Stsc1028g00001 515 Pfam MFS/sugar transport protein 40 297 - -
Stsc1028g00001 515 SUPERFAMILY MFS general substrate transporter 36 502 IPR036259 -
Stsc1028g00001 515 MobiDBLite consensus disorder prediction 1 27 - -
Stsc1028g00001 515 CDD MFS_SLC45_SUC 36 494 - -
Stsc1028g00001 515 FunFam Sucrose transporter SUC2 34 255 - -
Stsc1028g00001 515 NCBIfam sucrose/proton symporter 32 501 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1028g00001 Stsc-Chr1028 98 2720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1028g00001 16 515 Sucrose Transporter Gene Family AT1G71890 61.100 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1028g00001 K15378 - gmx:100786411 687.952