Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc102852g00001 ATGGCTCCAAAGAAGTTCCGGTTAAAGGAAATTAAAAAGGCAACAGGTGGATTCAGCCTTCAAAACAAGCTTGGTGAAGGTGGTTTTGGGACAGTTTATAAGGGACTACTCGAAAACAAGGAGATAGCTGTGAAGAGTCACTCGAAGGATTCGCGCCAAGGGAAGCAAGAATTTGTAGCCGAA 183 0.4426 MAPKKFRLKEIKKATGGFSLQNKLGEGGFGTVYKGLLENKEIAVKSHSKDSRQGKQEFVAE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc102852g00001 61 SUPERFAMILY Protein kinase-like (PK-like) 4 61 IPR011009 -
Stsc102852g00001 61 Gene3D Phosphorylase Kinase; domain 1 3 61 - -
Stsc102852g00001 61 ProSiteProfiles Protein kinase domain profile. 18 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc102852g00001 61 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 61 - -
Stsc102852g00001 61 ProSitePatterns Protein kinases ATP-binding region signature. 24 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc102852g00001 Stsc-Chr102852 111 293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc102852g00001 3 61 Receptor kinase-like Gene Family AT1G56120 60.000 6.82e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc102852g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc102852g00001 - - vum:124838792 108.612