Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc101g00008 ATGATTTCACATTTTGTCAGTTCACAGGATGGTGTTGAAACAAAGAAACTTGCTTCAGAGATAGCTGATATTTCCATAAAAGAAGAATCTTCAGGCACTCCTACTACTAGTAGTAATCAAGATGGGGGTTTCTTGTGGAAGGATGGTTTCGCGAATAATTCGGACTCTAGAAAAGAGGAAAAGGTTGGTTCCTTGTCTTTCAGCGTAACCAGTGCGACTTCACGTCAGCTGAGTGAATTGAACAAGAAATCAGTTCCGAGTGATGCGATGAATTCGATTCAGAAGTCTCCAGAACTGAAGAGTCCCGTTGCAAAGCCCGCAGCTCGGGCCAAAGTTCCTTTCGAAAAAGGATATAGTCAGATGGATTGGCTTAAGCTTACTTGGACGCATCCTGACCTTGCAGGCTTAAAGGGACAATCAAATAAGAGACTTATTCCACTGGATGAAGTTAGAAAGCACCAATCAGAAGGTGAAATGTGGACTGTTTTAAAAGGACATGTCTACAATATATCACCATATATGAAGTTTCACCCTGGAGGTGTGGATATGTTGATGAAGGCAGTGGGAAAAGATTGCACATCTCTCTTCAGTATCCGTTTTCTTTTTTGA 609 0.4154 MISHFVSSQDGVETKKLASEIADISIKEESSGTPTTSSNQDGGFLWKDGFANNSDSRKEEKVGSLSFSVTSATSRQLSELNKKSVPSDAMNSIQKSPELKSPVAKPAARAKVPFEKGYSQMDWLKLTWTHPDLAGLKGQSNKRLIPLDEVRKHQSEGEMWTVLKGHVYNISPYMKFHPGGVDMLMKAVGKDCTSLFSIRFLF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc101g00008 202 MobiDBLite consensus disorder prediction 77 98 - -
Stsc101g00008 202 Pfam Cytochrome b5-like Heme/Steroid binding domain 147 196 IPR001199 -
Stsc101g00008 202 MobiDBLite consensus disorder prediction 26 43 - -
Stsc101g00008 202 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 173 180 IPR018506 GO:0020037
Stsc101g00008 202 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 142 196 IPR001199 -
Stsc101g00008 202 SMART Cyt_b5_2 145 202 IPR001199 -
Stsc101g00008 202 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 142 196 IPR036400 -
Stsc101g00008 202 Gene3D - 140 198 IPR036400 -
Stsc101g00008 202 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 8 197 - -
Stsc101g00008 202 MobiDBLite consensus disorder prediction 77 105 - -
Stsc101g00008 202 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc101g00008 Stsc-Chr101 92968 97430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc101g00008 140 196 NADPH P450 reductases AT5G53560 36.842 2.10e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc101g00008 - - qsa:O6P43_029574 248.825