Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1016g00001 ATGCAAACACATCAACTCACGCGCACTATTCTCACTTTCCTTCTGGTGTTCACATCTCCAACATTCTTTATCTTCTCCATCGCATCACCACCGTCCAAAAACAACCGCAGCAACAACGCGCAAGATCTGGTCCGTTCATCATGCGTTCACACAAGGTACCCGAGTATCTGCCTCAGAACACTCTCCAACTACGCTGGGCCTGCCAATTCCCCGTTGGACGTGGCCCGGGCCGCACTCAGGGTAAGCCTGGCCCATGCCCGACGAGCCAGCAGGTACCTCAAGTCTCTCCAATCACCAGGCTCAGGCCCAGGTCCAGGCCCAAGCCCGTTGGGCCCAAAGTCCAAGAGGCAGAGAGTGGCGCTGAGTGATTGCATTGAGCAGATGGCGGACTCGGTGGACGAGCTGAAGAGGAGCCTTGAGGAGCTGCAGCACCTCAAAACGGCAACGTTTGAGTGGCAAATGAGTAACGCACAGACTTGGGTGAGTGCTGCCCTCACAGATGGAGACACGTGTCTCGATGGATTTGGAGATGGAATCAGCGGCGGCAGCAGAGGCGGTGGAGGAAACGAGCGTGACAAGATGAGGAGGAGCGTGAAGCGGAGGGTGACGGACGTGGCAAGGGTCACGAGCAATGCACTTTACATGATTAACCGTGCTGGTGAAACAAGGCCCGGAAAGCCTAAGCGTCATTCTTCGCCACGTGGCATCCATTCCAATAACTGA 723 0.5588 MQTHQLTRTILTFLLVFTSPTFFIFSIASPPSKNNRSNNAQDLVRSSCVHTRYPSICLRTLSNYAGPANSPLDVARAALRVSLAHARRASRYLKSLQSPGSGPGPGPSPLGPKSKRQRVALSDCIEQMADSVDELKRSLEELQHLKTATFEWQMSNAQTWVSAALTDGDTCLDGFGDGISGGSRGGGGNERDKMRRSVKRRVTDVARVTSNALYMINRAGETRPGKPKRHSSPRGIHSNN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1016g00001 240 MobiDBLite consensus disorder prediction 217 240 - -
Stsc1016g00001 240 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 218 IPR035513 -
Stsc1016g00001 240 Coils Coil 125 145 - -
Stsc1016g00001 240 SMART PMEI_2 39 215 IPR006501 GO:0004857
Stsc1016g00001 240 FunFam Pectinesterase inhibitor 3 39 220 - -
Stsc1016g00001 240 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 219 IPR035513 -
Stsc1016g00001 240 MobiDBLite consensus disorder prediction 93 118 - -
Stsc1016g00001 240 Pfam Plant invertase/pectin methylesterase inhibitor 42 214 IPR006501 GO:0004857
Stsc1016g00001 240 NCBIfam pectinesterase inhibitor domain 17 217 IPR006501 GO:0004857
Stsc1016g00001 240 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 214 - -
Stsc1016g00001 240 MobiDBLite consensus disorder prediction 181 201 - -
Stsc1016g00001 240 CDD PMEI-like_3 46 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1016g00001 Stsc-Chr1016 5621 6701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1016g00001 27 222 Carbohydrate Esterase AT3G14310 28.079 2.19e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1016g00001 - - aip:107634498 361.303