Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1006g00001 ATGGAATCTTCTACTTCAGATCGATCAGTGGATTTGGAATCGGATCTTTCATGTGAATCAGAGAATACAGGACAATTTTTATGTGATGTTGATGACAAGTATGTGCCAAAGGTTGGCATGCTTTTCGAATCTCTTGAGGCAGCTAGGATATCTAATAGGGATTATGTTAAACGCGCAGGCTTCTCGACAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAATGAAATTCTAAACCAGCTTCTTTCATGTAATAGAGAGGGGAAAATGAGATCCGAGTTAGCAGTTTTAGAGAAGACAAATCCTATATTCGCTGCTAATTGTCCAGCGAGAGTTTATGTGCATCATTTGAAGATAATTGGACTTTGGGAGATATCAAAGGTGGTTTTAGGATCTTCACACCCTTGCTATCCAAATCAAGCAGAATTGTTTCCCCAATACTGA 444 0.3784 MESSTSDRSVDLESDLSCESENTGQFLCDVDDKYVPKVGMLFESLEAARISNRDYVKRAGFSTKIRNTNKSKKSNEILNQLLSCNREGKMRSELAVLEKTNPIFAANCPARVYVHHLKIIGLWEISKVVLGSSHPCYPNQAELFPQY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1006g00001 147 Pfam FAR1 DNA-binding domain 54 137 IPR004330 -
Stsc1006g00001 147 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1006g00001 Stsc-Chr1006 8154 9604 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc1006g00001 FAR1 1.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1006g00001 - K13993 adu:110280446 144.821