Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3759 ATGGGAGCACGTGcggttaataataataatagtagtagtaGACGAGTTGAAGGAGCTGGAAGGCCTCAACCGCAAGCTCCAGAGCTCTCAGGAGCAGAGCAAGACTCTTCACACTGCGAAGGCCGTCAAGGACCTCCGGTCTTGCATGGACGGCGCGTCGCGCTTGCTCTGAAGAAGAAGCTCATCAAGGTCAAGTTGGAGGCTCTGGAACGATCCGACGCCGCCAGTTGGAGCTTGCCGGGTTGCGGACCCGGATATTCGTCAGACCGGACCCGCTCCTCTGTGGTCAACGGGTTGAAGAAGAAGCTAAAGGACTCTATGGACAGCTTCAACAACCTCAGGCAGCAGATCTCATCGGAATACCGGGAGACCGTACAACGCAGGTATTTCACGATCACCGGCGAGAATCCCGATGAGAAGACCTTTGACATCTTGATCTCAACAGTCACGGTGCCGTCGACAACGAGCGGCGGCGATGGCAGACTCATTTTCAAAGCCTCGCTGTGCTGCAAAGATCGCTCCGACCTCATCGTGGCCGCCGATAAAGACCACAGCATCGAATCCATCCACTTCCTTCAAAATGCACTCAAATCCTTGAAATTCAAGTGGGGATGGGCCCTTGTGGGGAACTCAGATATCCATCATATCCAGAAAACAATGGAACCTGTAGATTTTTTGGgattggaggaggaggagaagaagaaagatggaaACCGGGGAAGAAGCAAACATGGAGAAAATAATGAGTAA 750 0.4907 MGARAVNNNNSSSRRVEGAGRPQPQAPELSGAEQDSSHCEGRQGPPVLHGRRVALALKKKLIKVKLEALERSDAASWSLPGCGPGYSSDRTRSSVVNGLKKKLKDSMDSFNNLRQQISSEYRETVQRRYFTITGENPDEKTFDILISTVTVPSTTSGGDGRLIFKASLCCKDRSDLIVAADKDHSIESIHFLQNALKSLKFKWGWALVGNSDIHHIQKTMEPVDFLGLEEEEKKKDGNRGRSKHGENNE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3759 249 Pfam Syntaxin 58 148 IPR006011 GO:0016020
Sto9g3759 249 MobiDBLite consensus disorder prediction 1 47 - -
Sto9g3759 249 MobiDBLite consensus disorder prediction 227 249 - -
Sto9g3759 249 Coils Coil 96 116 - -
Sto9g3759 249 PANTHER BNAA05G27280D PROTEIN 53 149 - -
Sto9g3759 249 PANTHER SYNTAXIN 53 149 IPR045242 -
Sto9g3759 249 SUPERFAMILY t-snare proteins 61 143 IPR010989 GO:0016020|GO:0016192
Sto9g3759 249 MobiDBLite consensus disorder prediction 1 18 - -
Sto9g3759 249 Gene3D - 53 173 - -
Sto9g3759 249 SMART SynN_4 10 122 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3759 Sto-Chr9 35706219 35708892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3759 53 148 SNARE and Associated Proteins AT3G11820 78.351 2.18e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3759 K08486 - qsu:112032489 148.673