Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3743 ATGGGCCTCACTATGGACCCTTTCTCTCTCCACCACCGCAAAGACAAGGTTGTCGTCATTATAGGCGCCATCGGCACCGGCGAGTCCAAACTCGCCATCAACCTCGCTGCTCGCTTTCCTCCCGCCGAGATCGTCAACTCCAACAAAATGCAAGTCTACAAAGGCCTCAACATCACCACCAACAAGGTCACTGAAGAAGAATGTTGCGGCGTCCCACACCACCTCCTCGGCATCGCCGATACGAACTCCAATTTCACCGCCAATGATTTCACCCACCATGCCTCATCCGCCATTGATTCCATCGTCCAGCGAGATTGCCTCCCCATCGTCGCTGGTGGCTCCAAATCCTACATCGAAGCCCTCGTCCAAGACGACGCTGCATTTCGCTTGAAATTCGAGTGTTGCTTCCTCTGGGTAGATGTTGATCCTCTCGTGCTCGATCTTTTCCTGTCGAAGTGGGTGAACCGGATGATCAAATCGGGCCAAATCGACGAGGTCTGTCCATTTTTTGACCCGGCAAGGGATTACAATAGAGGAATTCGAAAGACCATAAGAGCACATGAATTCGATCAGTATTTCAGAACAGAGTCTATTGTCGATGAAAGAAGCAAGAAGTTTCTAGAGGCTGCCATTGCGAAAATCAAATCGAATAATTGCACACTCGCTCACCGTCAGCTTCAAAAGATTCATCATCTTCATTCAATGTGGAAGCAAAATATAACCCGCCTTGATGCGACCAAAGCATTCAAGAAGAGCGCCGAGAAAGCAGAGGAGACATGGGAGAATCAGGTGGTGGCGAAGAGCCATAGGATTGTGCACAAGTTCTTGTACGAGGAAAGTGTGGTGGTTTCGGCAGCCATCGTGATGATGGCGGTGTCGCCGAAGCAGGTGGTGGTGGCAACAGGCCCAAGCATGGAGGAGTTCAGTGACCTAGTGACATTAACAAAATGA 951 0.5026 MGLTMDPFSLHHRKDKVVVIIGAIGTGESKLAINLAARFPPAEIVNSNKMQVYKGLNITTNKVTEEECCGVPHHLLGIADTNSNFTANDFTHHASSAIDSIVQRDCLPIVAGGSKSYIEALVQDDAAFRLKFECCFLWVDVDPLVLDLFLSKWVNRMIKSGQIDEVCPFFDPARDYNRGIRKTIRAHEFDQYFRTESIVDERSKKFLEAAIAKIKSNNCTLAHRQLQKIHHLHSMWKQNITRLDATKAFKKSAEKAEETWENQVVAKSHRIVHKFLYEESVVVSAAIVMMAVSPKQVVVATGPSMEEFSDLVTLTK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3743 316 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 283 IPR039657 -
Sto9g3743 316 Pfam IPP transferase 51 124 - -
Sto9g3743 316 Pfam IPP transferase 131 227 - -
Sto9g3743 316 Gene3D - 14 276 IPR027417 -
Sto9g3743 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 125 IPR027417 -
Sto9g3743 316 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 11 283 - -
Sto9g3743 316 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 143 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3743 Sto-Chr9 35599928 35603423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3743 131 280 C2H2 Transcription Factor Family AT2G27760 27.528 2.58e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3743 K10760 - pvy:116132356 308.916