Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3731 atgatttacgtaCATGCCAAGGGAATGATTGTGGATGATGAATATGTGATACTTGGGTCAGCCAATATAAATCAACGATCTATGGCGGGTTCAAGAGATACAGAGATAGCTATGGGTGCATATCAACCCCATCATACATGGGGAAAGAATAGGGCACAGCCTCGTGGTCAGGTATATGGGTATAGAATGTCATTGTGGGCAGAACATATGGGAGTGATAGATGGTTGCTTCAAGGAACCTGAAAGCTTGGATTGCGTGAAGAGTGTGAATAGGATTGCTGAGGAGAACTGGAAGAGGTACACAGGGGAGGAGTATGCTCCATTGCAGGGGCACCTTCTGAAATACCCAGTCTATGTAGATGCAAATGGAAGGGTACGCCCCTTACCTGGATTTGAAACTTTTCCAGATGTTGGGGGCAAGGTACTTGGTTCCCGCTCTACCCTTCCTGATGCCCTCACCACATAA 465 0.4581 MIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWGKNRAQPRGQVYGYRMSLWAEHMGVIDGCFKEPESLDCVKSVNRIAEENWKRYTGEEYAPLQGHLLKYPVYVDANGRVRPLPGFETFPDVGGKVLGSRSTLPDALTT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3731 154 Pfam Phospholipase D C terminal 75 144 IPR024632 -
Sto9g3731 154 Gene3D Endonuclease Chain A 2 66 - -
Sto9g3731 154 SMART pld_4 1 27 IPR001736 GO:0003824
Sto9g3731 154 PANTHER PHOSPHOLIPASE D 1 153 - -
Sto9g3731 154 Pfam Phospholipase D Active site motif 1 27 IPR001736 GO:0003824
Sto9g3731 154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
Sto9g3731 154 SUPERFAMILY Phospholipase D/nuclease 2 85 - -
Sto9g3731 154 PANTHER PHOSPHOLIPASE D 1 153 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3731 Sto-Chr9 35538199 35538738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3731 1 153 Phospholipase D Gene Family (Wang group) AT4G00240 66.667 7.78e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3731 K01115 - qsu:112004455 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3731 9 35538199 35538738 Sto9g3731 9 35538199 35538738 ECH