Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3716 ATGTGTTGGAAAACAAAGGGAGTGGTGAAACTGCCAGCAAATTTGGTAGTTCCAGCGGTGTTTGCGTTGGGAGATTCAATCATGGACACTGGGAACAACAACAATTTGTTAACACCGGCTAAGTGCAATTACCCTCCTTATGGCAAAGACTTCGAGGGAGGCCTCTCCACTGGCCGATGTTGCAATGGAAAGGTTCCTTCTGATCTCGTCGTTGAGGAATTGGGTATTAAGACCCTTTTGCCACCCTATTCCGATCCAAATCTCACGCCCCAGGATCTGGCCACCGGCGTCTGCTTTGCCTCATCAGCCGCTGGATATGATCCTGCCACATCCGCCTTAGCgCCAGCCACATCAATGTTGGATCAAGTCAAACTGTTCAAAGAATACGCAGGGAAGCTGAAAGGGGTTGTGGGAGAGGAGAGAGCAAACTTCATCCTAACCAACGGCGTCGTTCTGGTAGTAGCAGGCAGTGATGACATTGCCAACACTTACTACGGCGCTCGCTTTAGGCAACTCCAATTTGATGTTGCTGCTTACACGGATTTTATGGTGAAGGAAGCCTCTGATATCGTGAAGGGACTATATGAAGCGGGAGCACGAAGAATTGGAGTATTCAGTGCACCCCCAATTGGCTGTGTGCCTTCGCAGAGAACTCTGGCCGGAGGGATTCAAAGAGACTGTGCCCACAACTACAACGACGCTGCCAAGTTATTTAACTCCAAATTGGCAAACCAATTGCAAACCCTCCAACACAACTTCCCCAATGCCACCTTCCGTTACATTGATGTTTACAACCCTCTACTTGATATCATTTTAAACTACAACAAATATGGCTTCAAAGTGGTGGACAGAGGTTGCTGTGGCACAGGCATAATAGAGGTAGCAGAATTGTGCAATCACCTTGTTCCAACGTGTCCCAATAATTCCGATTATGTATTTTGGGACAGTTTCCACCCCACAGAAGCAGCATACAGAAAGCTAATTCCTCCAATTATTCAAAAATACGTCGATGAGTACTCCCGGGGAATAGGAATGGAATTAGGGAAGGCGGAGGTGAAATTGGTGGGTGAAAACATGACAGTGACGGCAGTATTAGTGTTAGGAGATAGCATAATGGACACaggaaacaacaacaacaacatgaAAACATTGGCCAGATGCAATTTCCGTCCTTATGGCAAAGATTTCCACGGCGGCATTCCCACCGGCCGATTCGGCAATGGCAAGGTTCCATCTGATCTCATCGTGGAAGAATTGGGAATTAAGGAACTTCTGCCTGCTTATTTGGATCCAAATCTGCAACCAGGGGATTTGGCGACAGGCGTGTGCTTTGCATCGGGTGGCACCGGATATGATCCTTTGACGCCCAAATTAGCGTCAGCCATATCGCTGTGGGATCAAGTAGAGCTGTTGAAAGAATACATAGTGAAGCTAGAAGGAGTTGTTGGAGAGAGCAGAAGGAAGTTCATCATATCCAACAGTGTTGCGTTTGTGGTGGCGGGCAGCAATGACATTTCAAACACTTACTTTCTGTCTCACGCTAGACAAGTGGAATACGATGTTCCTGCTTACACCGACTTTATGGTTGCTTCTGCCTCCAACTTGTTCAACCAAATCTACGCACTCGGAATACGACGAATAGGAGTGCTCAGCGCTCCCCCAATAGGGTGTGTGCCATTCCAGAGAACCCTGCTTGGAGGATTGGACAGAGGATGCGCACGCAACTACAATGACGCTGCTCAGTTATTCaattccaaactccaaacccagaTCGCTTCCCTTAATCGCAATTTCCCTGATGCCAGATTTGTTTACATCGATGTTTATAACCCTCTTCTTGATATCATTCTCAACTACCAAAATTATGGCTTCAAAGTCCCCGACAGAGGCTGTTGTGGCACTGGCGAATTGGAGGTTGCATTTTTGTGCAACCACCTTGATCACACCTGCCCTCATGTTTTCGACTATGTCTTTTGGGATAGTTTTCATCCCACTGAGACTGTTTACAGAAAGCTCATCCCTCCCATCCTTCAAAAATATCTCCACCGATTCTTCTGA 2058 0.4611 MCWKTKGVVKLPANLVVPAVFALGDSIMDTGNNNNLLTPAKCNYPPYGKDFEGGLSTGRCCNGKVPSDLVVEELGIKTLLPPYSDPNLTPQDLATGVCFASSAAGYDPATSALAPATSMLDQVKLFKEYAGKLKGVVGEERANFILTNGVVLVVAGSDDIANTYYGARFRQLQFDVAAYTDFMVKEASDIVKGLYEAGARRIGVFSAPPIGCVPSQRTLAGGIQRDCAHNYNDAAKLFNSKLANQLQTLQHNFPNATFRYIDVYNPLLDIILNYNKYGFKVVDRGCCGTGIIEVAELCNHLVPTCPNNSDYVFWDSFHPTEAAYRKLIPPIIQKYVDEYSRGIGMELGKAEVKLVGENMTVTAVLVLGDSIMDTGNNNNNMKTLARCNFRPYGKDFHGGIPTGRFGNGKVPSDLIVEELGIKELLPAYLDPNLQPGDLATGVCFASGGTGYDPLTPKLASAISLWDQVELLKEYIVKLEGVVGESRRKFIISNSVAFVVAGSNDISNTYFLSHARQVEYDVPAYTDFMVASASNLFNQIYALGIRRIGVLSAPPIGCVPFQRTLLGGLDRGCARNYNDAAQLFNSKLQTQIASLNRNFPDARFVYIDVYNPLLDIILNYQNYGFKVPDRGCCGTGELEVAFLCNHLDHTCPHVFDYVFWDSFHPTETVYRKLIPPILQKYLHRFF 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3716 685 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 364 375 IPR008265 GO:0006629|GO:0016298
Sto9g3716 685 SUPERFAMILY SGNH hydrolase 495 676 - -
Sto9g3716 685 Gene3D SGNH hydrolase 351 679 IPR036514 -
Sto9g3716 685 Gene3D SGNH hydrolase 10 334 IPR036514 -
Sto9g3716 685 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 20 31 IPR008265 GO:0006629|GO:0016298
Sto9g3716 685 PANTHER GDSL ESTERASE/LIPASE EXL3 345 681 - -
Sto9g3716 685 PANTHER GDSL ESTERASE/LIPASE EXL3 5 336 - -
Sto9g3716 685 CDD SGNH_plant_lipase_like 18 325 IPR035669 -
Sto9g3716 685 Pfam GDSL-like Lipase/Acylhydrolase 364 672 IPR001087 GO:0016788
Sto9g3716 685 Pfam GDSL-like Lipase/Acylhydrolase 20 327 IPR001087 GO:0016788
Sto9g3716 685 CDD SGNH_plant_lipase_like 362 670 IPR035669 -
Sto9g3716 685 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 345 681 - -
Sto9g3716 685 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3716 Sto-Chr9 35454109 35458001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3716 358 678 Pollen Coat Proteome AT1G75910 41.049 5.84e-71 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3716 - - cit:102615308 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0115 5 659941 663794 Sto9g3716 9 35454109 35458001 CCT
Sto9g3716 9 35454109 35458001 Sto9g3716 9 35454109 35458001 ECH