Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3712 ATGGAACAAGTGGAGCTTCCCTCCTCTTCGCCTTCACAAccaaccaaaccccaaactgtttCCTTCTTTCGCTTGTTTGCTGTTGCTGATACACTTGACTATGCCTTAATGTTCTTGGGAACCATTGGTGCCTGCGTCCATGGTGCAgctcttcctcttttctttattttgtttggccGTATGATTGATTCTCTGGGACATCTTTCTGCCCATCCTCACCACTTGTCCTCACGCATCTCTCAGAATGCTTTATACTTGCTCTATCTTGGACTCCTCGTTCTGGCATCAGCTTGGATGGGTAGGGTTGCATTCTGGATGCAAACAGGGGAGAGGCAAACCGCTCGCTTGCGCTTAAAGTATTTGCAATCCGTTCTCAAAAAAGATATTAATTTCTTTGACAACCAAGCCAAAGACGCTAATATCATTTTCCACATTTCCAGCGACGCAATACTGGTACAAGATGCAATTGGTGACAagATAGGCCATGCTATACGTTACCTCTCACAATTCATTGTTGGATTTGCCATTGGATTTACATCAGTGTGGCAGCTTACACTGCTCACCTTGGCTGTAGTTCCATTGATAGCTGTAGCTGGAGGAGCTTATACTATTACTATGTCTACCTTGTCTGAAAAAGGTGAAGCGGCTTATGCAGAAGCTGGGAAAGTGGCAGAAGAgATAATTTCTCAAGTGCGTACTGTATACTCATTTGTGGGAGAGGATAAAGCAGTTGGATCATACTCCAAATCACTTGATAAAGCTCTGAAACTAGGCAAGAAGAGTGGTTTTGCAAAAGGAGTTGGGGTAGGGTTGACATATGGGCTCTTGTTTTGCGCTTGGTCATTACTTCTCTGGTATGCAAGCATACTTGTGAGGCACCATAAAACAAATGGAGGCAAAGCATTCACAACTATCATTAATGTCGTCTTTAGTGGATTTGCTCTTGGTCAGGCTGCTCCAAACCTTGGTTCTATTGCTAAGGGGCGTGCAGCTGCGACTAATATCATGAACATGATTGCTTCAGTTTCAAACACTACTGGTAGCAGTTTGGACAAAGGGATTGTTTTGCCACAAGTACAAGGCCAAATTGAATTTTGTGAGGTCTGCTTTTCTTACCCCTCAAGATCCAACATCATCTTTCAAAATTTGACCTTCTCAGTAACTTCGGGCAAGACTATCGCAGTTGTTGGTCCTAGCGGTTCAGGAAAGAGTACTATCATTTCCATGATCCAGCGATTTTATGACCCTACTGCGGGTAAGATACTATTGGATGGACATGACTTGAATAGTCTTCAGTTGAAATGGTTGAGAGAACAATTGGGTTTGGTTAGTCAAGAACCAGCACTATTCGCCACAACAATATCTGAGAATATTTTACTCGGAAAAGAAGATGCCAACATGGATCAAATCATACAAGCTGCCAAAGTTGCAAATGCTCATTCTTTCATTGAAGGCTTACCTGATGGGTATCACACTCAAGTTGGTGAGGGTGGCACACAGCTGTCAGGAGGGCAAAAGCAAAGGATCGCTATAGCAAGAGCTGTGCTCAGGAATCCAAAAATATTACTTCTAGACGAGGCTACCAGTGCCCTAGATGCAGAATCAGAACTCCTAGTTCAGCAGGCACTAGAAAAATTAATGTCGAATCGTACTACAATAGTTGTTGCTCACCGATTATCCACCATTCGTGATGTAGATACAATTGTGGTCTTGAAGAATGGTCAAGTTGTGGAAAGCGGTACTCATTTGGAGTTGATGTCAAAAAATGGGGACTACGTGAATCTGGTGAGTTTACAAGCATCTGAAAACCAAACGACAAGTTCTAGTGCAATATCTCGCTCTGGAAGTTCAAGAAATTCTAGTTTTCGAGACAACCAGAATTACGAGGAGGAATTGAATTCAGTCTCTACAAGAAAGTTGCAAACAAGTGACGAAAAGTCCATCCCATCAATCCTGGACTTATTGAAACTGAATGCTCCAGAGTGGCCTTATGCAATACTTGGATCAATGGGTGCAATTATGGCAGGCATGGAAGCTCCTCTCTTTGCCCTTGGTATCACACATATTTTAACTGCTTTCTATTCTCCTAACGGTTCTAAGATCAAGCAAGAGGTTGATCGGGTAGCTCTCATATTTGTTGGAGTGGCTATTGTTACTATACCAATTTATTTATTGCAACATTACTTTTATACATTGATGGGAGAGCGTCTCACCGCTCGTGTACGCTTGCTAATGTTCTCAGCTATCCTAACCAATGAAGTTGCATGGTTCGATTTGGATGAGAACAACACCGGATCACTGACAACTATGCTAGCAGCAGATGCAACATTAGTGAGAAGTGCTCTGGCTGATAGGCTCTCAACTATTGTACAAAATGTAGCTCTCACTGTAACAGCATTTGCTATTGCCTTCACACTGAGTTGGAGACTAACAGCTGTGGTTGTAGCCTGCATGCCTCTTCTTATTGGAGCTTCTATCACTGAACAACTATTTCTTAAGGGATTTGGAGGAGATTACAACGTTGCCTACTCTAGAGCAACTTCGTTGGCACGTGAAGCTATTTCTAATATACGTACCGTTGCTGCTTTCGGAGCAGAAGATCGGATCTCGTTCCAATTCGCATTTGAATTGAACAAGCCCAATAAGCAAGCACTTTTACGAGGCCACATATCAGGATTTGGATATGGTGTAACACAACTATTGGCTTTTTGCTCCTATGCACTGGGCCTTTGGTATGCATCCATCTTAATCAAGCATAAAGAGTCTAATTTCGGAGACATTATCAAGTCCTTTATGGTATTAATCATCACTGCTCTAGCAATAGCAGAAACACTAGCTCTTACACCAGACATTGTAAAGGGATCACAAGTACTAGGGTCGGTATTCGGCATTCTTCGAAGGAAAACAGTCATCCCCCCCGATGACCCAAACTTGAAGATGGTAATTGATGTGAAAGGAGAGATAGAGTTTAAGAATGTATGCTTCAGCTACCCAATGAGGCCCGATGTCAccattttccaaaacttaaaCCTAAAAATTAAAGCAGGAAAAAGCCTAGCAGTAGTTGGTCCAAGTGGTTCGGGGAAGAGTACTGTGATTTCATTGGTAATGAGATTTTATGACCCTAGTTTTGGGATGATTTTGGTGGATGGATGTGATATTAAAAGCTTGAACTTGAGATCCTTAAGGCTGAAAATAGGTTTGGTTCAACAAGAACCTGCTTTATTCTCTACCACAATATATGAAAACATCATGTATGGAAATAAGGAAGCATCAGAAATTGAGGTAATGAAGGCAGCAAAAGCAGCAAATGCTCATGAATTCATCAGTAGAATGCCTCAAGGGTATGAAACAGAGGTTGGTGATAGAGGAGTGCAATTATCAGGCGGGCAGAAACAGAGGATTGCAATTGCTAGAGCAATTCTAAAAGATCCATCCATTCTTCTAATGGATGAAGCAACGAGTGCATTGGACACAGTATCAGAGAGGCTAGTCCAACAAGCTTTGGAGAAGCTTATGGAAGGCAGAACAACAATCTTAGTAGCACACAGGCTGTCAACAGTTCGAAATGCAGACAACATTGCAGTGTTACAAAACGGGAGGGTGGTTGAGATGGGTAGCCATGACCGTCTCATTGCTAAACCTGAAAGCATATATAAGCAATTGGTCAGTTTACAGCAACAAAACGGTGATCAGGCACTATGTTGA 3708 0.415 MEQVELPSSSPSQPTKPQTVSFFRLFAVADTLDYALMFLGTIGACVHGAALPLFFILFGRMIDSLGHLSAHPHHLSSRISQNALYLLYLGLLVLASAWMGRVAFWMQTGERQTARLRLKYLQSVLKKDINFFDNQAKDANIIFHISSDAILVQDAIGDKIGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYAEAGKVAEEIISQVRTVYSFVGEDKAVGSYSKSLDKALKLGKKSGFAKGVGVGLTYGLLFCAWSLLLWYASILVRHHKTNGGKAFTTIINVVFSGFALGQAAPNLGSIAKGRAAATNIMNMIASVSNTTGSSLDKGIVLPQVQGQIEFCEVCFSYPSRSNIIFQNLTFSVTSGKTIAVVGPSGSGKSTIISMIQRFYDPTAGKILLDGHDLNSLQLKWLREQLGLVSQEPALFATTISENILLGKEDANMDQIIQAAKVANAHSFIEGLPDGYHTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELLVQQALEKLMSNRTTIVVAHRLSTIRDVDTIVVLKNGQVVESGTHLELMSKNGDYVNLVSLQASENQTTSSSAISRSGSSRNSSFRDNQNYEEELNSVSTRKLQTSDEKSIPSILDLLKLNAPEWPYAILGSMGAIMAGMEAPLFALGITHILTAFYSPNGSKIKQEVDRVALIFVGVAIVTIPIYLLQHYFYTLMGERLTARVRLLMFSAILTNEVAWFDLDENNTGSLTTMLAADATLVRSALADRLSTIVQNVALTVTAFAIAFTLSWRLTAVVVACMPLLIGASITEQLFLKGFGGDYNVAYSRATSLAREAISNIRTVAAFGAEDRISFQFAFELNKPNKQALLRGHISGFGYGVTQLLAFCSYALGLWYASILIKHKESNFGDIIKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILRRKTVIPPDDPNLKMVIDVKGEIEFKNVCFSYPMRPDVTIFQNLNLKIKAGKSLAVVGPSGSGKSTVISLVMRFYDPSFGMILVDGCDIKSLNLRSLRLKIGLVQQEPALFSTTIYENIMYGNKEASEIEVMKAAKAANAHEFISRMPQGYETEVGDRGVQLSGGQKQRIAIARAILKDPSILLMDEATSALDTVSERLVQQALEKLMEGRTTILVAHRLSTVRNADNIAVLQNGRVVEMGSHDRLIAKPESIYKQLVSLQQQNGDQALC 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3712 1235 CDD ABC_MTABC3_MDL1_MDL2 988 1226 - -
Sto9g3712 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g3712 1235 Pfam ABC transporter transmembrane region 670 939 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g3712 1235 Pfam ABC transporter transmembrane region 37 311 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g3712 1235 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 541 1226 - -
Sto9g3712 1235 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 412 560 - -
Sto9g3712 1235 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 21 464 - -
Sto9g3712 1235 Pfam ABC transporter 381 529 IPR003439 GO:0005524
Sto9g3712 1235 Pfam ABC transporter 1007 1155 IPR003439 GO:0005524
Sto9g3712 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 988 1224 IPR003439 GO:0005524
Sto9g3712 1235 SMART AAA_5 389 575 IPR003593 -
Sto9g3712 1235 SMART AAA_5 1015 1201 IPR003593 -
Sto9g3712 1235 Coils Coil 625 645 - -
Sto9g3712 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 666 953 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g3712 1235 CDD ABC_6TM_Pgp_ABCB1_D2_like 655 971 - -
Sto9g3712 1235 Gene3D - 979 1233 IPR027417 -
Sto9g3712 1235 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 335 - -
Sto9g3712 1235 CDD ABC_MTABC3_MDL1_MDL2 363 599 - -
Sto9g3712 1235 SUPERFAMILY ABC transporter transmembrane region 24 335 IPR036640 GO:0005524|GO:0016021
Sto9g3712 1235 Gene3D - 353 600 IPR027417 -
Sto9g3712 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 599 IPR027417 -
Sto9g3712 1235 MobiDBLite consensus disorder prediction 606 625 - -
Sto9g3712 1235 ProSitePatterns ABC transporters family signature. 1127 1141 IPR017871 GO:0005524
Sto9g3712 1235 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 464 IPR039421 -
Sto9g3712 1235 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 541 1226 IPR039421 -
Sto9g3712 1235 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 412 560 IPR039421 -
Sto9g3712 1235 Gene3D ABC transporter type 1, transmembrane domain 24 955 IPR036640 GO:0005524|GO:0016021
Sto9g3712 1235 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524
Sto9g3712 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 977 1226 IPR027417 -
Sto9g3712 1235 SUPERFAMILY ABC transporter transmembrane region 654 968 IPR036640 GO:0005524|GO:0016021
Sto9g3712 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 598 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3712 Sto-Chr9 35427043 35431562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3712 667 1234 Calmodulin-binding Proteins AT2G36910 41.187 7.37e-130 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3712 K05658 - gmx:100787093 1979.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3712 9 35427043 35431562 Sto9g3712 9 35427043 35431562 ECH