Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3710 ATGGGCAAAACATCTGAATCTGCGGAAACTTGTCCATGGCTTTGGATCATTGAAGCACTAGCAGGATTCGAGGGAATAGACGTATCTACGTTACTTGaTTTGATTGAGGTATTCCCTGTAGTGCACAATGACCTTGGTAAAAATATAAGGGAATTGATTGCCATGAGATATTTGGAGGCCTTGTTTGGTTCTGCTAGTGGGGTTAACTCCCATGCTACTAGCCTGGATTCCAGCGTAGGGCCTGATTTCTCCCTTAGTTGTGAAGATGTTCTTCGACAAATATTGTATGAGGTACTATTGTCAGATACGAACATAGCTGGAGCCAAGGTTTTGAAACGAAACATATACCCATTTATCATGAACAAAAGAGCTAACACTATTAAGTGTGAATTAGAGAAGCTGAAACAATCAGTCACTGAAGGTACTCATCCATATGCTGAACGCTTAAGAAAAAGGAGTGGATTGGCACTTCAGAATTGGGATTACAAAGTGCCTGCAAGTGATGGAAAATGCAATGATCTCTCTGAGAAGGGTAATGAGAATTGCATTTATGTTGAGAGCATGGAAGCAATGGAAAACGCATCATCAGAAGAACATAAGCTTGATAAGAATTTTTCATCCTCCAAGAGAAATAGGGATTACTCAGATGATGAACAGGCTATTCGATTCCTACATGAGAAGCAAGTTGGTGTAGAATGTGATGATTTCCGAAGAaatgctaaaaaaaataaatgttatgCACCTTCTGAAATTGAGTTCAAGAAAGATAAGAGAGTTCATCCACATAGAAGGGATGTGTCTGAAAATTCAACGGAGAGAGTTCCTCTAACTTTTGAGAAAGGAGGACAGCATACGGAAAATAATAATGTGGCAACTCTGGGAGAAGGTTCAGTCTTAAAGGATCCAAATAGCTCTCACAAGCTGGTTGCTAGTGATGAAAATATTGTTGCAGTTAATGGCTGTGGAGTGGAGCACGGCAACATGATTGATTTTGCAGATAAAAACCATGAATTCTTGAGCTCTTTGGATATGTCTAGACAAGATTTCTCAGCAAGTACTGAATGGGGAGAAGGAAATCTTTGTATAAAGTGTAAAAAAGGTGGTATTTTACTGATTTGTAAAACAACTACATGTCCATTAATGGTTCATGAAAGTTGTCTGGGTGCTCCTGCTCGGCTTGATGCAGAGGAATGTCTTGAAGCCAAGAAAAAGGCTTCCTTAGCAAAGGAAGACTTGTGTACCTTCCTTGGTAAGACTACAGAGCATCGAGCCGGTGAACTATGTGGAGTTCATAGAAAAGAGAATAATCTTTCAGTAAGGCCCAAGTGTGACCATGTTCATGTCAAAGACCATGGAAATAATCGGTTACCAAGAACAGGGAGAGAAGACAACCCAGAAGATCATGTCATTAGGCATGTAAACGAAATCAATAATCTTCCATTTGAAAGAAGTCAGCAACAAGCAGAGCCCCCTACATCATATGATAATCTCCtcccatcttgcagagaggagGGAATTGAAAATAATAGGATAGAAGCAAAATTTCCCTCTGTTAATCAAAACAATACAGGGAAACAAACTCAGCTTCATGTGCCAGAACAACAAAAGACTAATCAAACAGAGGGCCCGGATTTTACTCATGATAATGAAGAAGATAAGATTTTTGAAGATGACCCGGCAAAACCTATCAATTATAGACACACAATGAGATCCGAAAAGTGTGAAGCACAATACAAATCCCCATCAATCCCTCAGTTCGGAGGCTTAAGACGAAGGACAATTCCATGGACGGCTGAGGAGGAAGAAATGCTAAGGGAGGGAGTGCACAAGTTTGGGGTAGGTGACAAAAGAATGCCATGGAAACAAATTCTTGAATTTGGTTCTAATGTGTTTGTGAAGGAACGTACACCGGTAGACCTGAAGGATAAATGGAAGAACATCCGCAAAGCAAAATTTAAAAGGAATTGA 1968 0.3918 MGKTSESAETCPWLWIIEALAGFEGIDVSTLLDLIEVFPVVHNDLGKNIRELIAMRYLEALFGSASGVNSHATSLDSSVGPDFSLSCEDVLRQILYEVLLSDTNIAGAKVLKRNIYPFIMNKRANTIKCELEKLKQSVTEGTHPYAERLRKRSGLALQNWDYKVPASDGKCNDLSEKGNENCIYVESMEAMENASSEEHKLDKNFSSSKRNRDYSDDEQAIRFLHEKQVGVECDDFRRNAKKNKCYAPSEIEFKKDKRVHPHRRDVSENSTERVPLTFEKGGQHTENNNVATLGEGSVLKDPNSSHKLVASDENIVAVNGCGVEHGNMIDFADKNHEFLSSLDMSRQDFSASTEWGEGNLCIKCKKGGILLICKTTTCPLMVHESCLGAPARLDAEECLEAKKKASLAKEDLCTFLGKTTEHRAGELCGVHRKENNLSVRPKCDHVHVKDHGNNRLPRTGREDNPEDHVIRHVNEINNLPFERSQQQAEPPTSYDNLLPSCREEGIENNRIEAKFPSVNQNNTGKQTQLHVPEQQKTNQTEGPDFTHDNEEDKIFEDDPAKPINYRHTMRSEKCEAQYKSPSIPQFGGLRRRTIPWTAEEEEMLREGVHKFGVGDKRMPWKQILEFGSNVFVKERTPVDLKDKWKNIRKAKFKRN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3710 655 MobiDBLite consensus disorder prediction 517 542 - -
Sto9g3710 655 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 5 650 - -
Sto9g3710 655 Gene3D - 589 652 - -
Sto9g3710 655 MobiDBLite consensus disorder prediction 517 552 - -
Sto9g3710 655 Pfam Myb-like DNA-binding domain 595 647 IPR001005 -
Sto9g3710 655 SUPERFAMILY FYVE/PHD zinc finger 351 392 IPR011011 -
Sto9g3710 655 SMART sant 592 650 IPR001005 -
Sto9g3710 655 CDD SANT_TRF 594 649 - -
Sto9g3710 655 ProSiteProfiles Myb-like domain profile. 595 648 IPR001005 -
Sto9g3710 655 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 5 650 - -
Sto9g3710 655 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 595 652 IPR017930 -
Sto9g3710 655 SUPERFAMILY Homeodomain-like 590 649 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3710 Sto-Chr9 35406705 35409689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3710 596 647 Single Myb Histone (SMH) Gene Family AT5G67580 49.091 2.96e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g3710 Myb_DNA-binding 4.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3710 - - gmx:102661885 315.079