Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3685 ATGCGCGATTTCCAGAAATCGAAAAGAGTTTCATGGGCGTCCGATTCTGATATTTGTCAGGTTAGATTATTCTTATCCGAGGAATCTCCTTCACAAGTTGGATTAAGTGCCCAAGATGACCTCCAAGCAAAGACATCATTGCTGTCGCATCCAGGCGGAGGAGGCTCTGAGGGCATCCTACCTCCTGGCTTTGAGGGAGCTCATCCTTCAAGTCAGCTTCAGGTTAATCTGTCCCAAATTCCTATGATTAGATGGACTAATCCACCAAAGATGTTGCTGAATCTCACTTGGCTTGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAAAATAAGAGGGAGATGAGAGAACTTGAAGCTATTTATCCTCGCACATCTTCCATCCCCCCAAACCCCTCTGTGTCAATTGATGTGGCAGACTCACATTACACTGATAGTCAGACTGCTTTGATACCAATTACGCCTATAGAAGATGGAGATGCAGCGGAAGATATGTCATCTGGATCCATGGCGCCATTTGATGATTCAATGGGTTCACAGCCTCCTTCATTACCCGTTGGTGTACCTAAGGGCTCAAACTCTCCTGCAAGTGTAGAGTTAGCTCATGATGTAGCTGCTGCATCTCTAGCGTTAACCAATATCGTGCATAGCAGTGAGCATGGGAACTTGATTGACCACGAATTGCTAAATAAAATTCTCAGTAGCCCAGAATTGATTGAAAAGTTGGTTAGAGATTATGGAACTGTAAGCAACTCACAAGGTGTACCCAATGCGAGGTCAAATCCAGCGGCTTTTCCACATCCTCCAACTACTGTAAATCAAGTAGAAACTAGTACAACATCAGCTGCTTTTTCAGCCAGTGCTTCCTATCCTTCGTTATCTGGGGGCCAAGTGGTATTTAATCCTTCTCAATCGCTTACTTTACCTGCAGTGAGTCCAGTTACTGTATCTTCTTCAGCTATTGGAGGTCCTCCAGCGAAGGACTCCAACTACTATAAGAGCTTAATTCAGCAACACGGAGGAGAAAGACAAGAGACTCTCCCATACTCCGGTAATTGTTACATGCAGCAGCAGCCAGTGGGAAGCCAAGAAACAACACACAATTATAGATCAAGGGAACAAAAAACTAAGATAATGAAGCCTTGTATCTATTTCAACAGCCCTAGAGGATGCCGGAATGGAGTTAATTGTGCATACCAGCATGATGCAGAATTCCGGCCACGGGGTAGTGCTGTGCCAGGGATACAAAATTCTAAGAGAATGAAACTGGATAGCGAGATTAGCAGCTAG 1293 0.4486 MRDFQKSKRVSWASDSDICQVRLFLSEESPSQVGLSAQDDLQAKTSLLSHPGGGGSEGILPPGFEGAHPSSQLQVNLSQIPMIRWTNPPKMLLNLTWLVVAGEESKEVEDQNKREMRELEAIYPRTSSIPPNPSVSIDVADSHYTDSQTALIPITPIEDGDAAEDMSSGSMAPFDDSMGSQPPSLPVGVPKGSNSPASVELAHDVAAASLALTNIVHSSEHGNLIDHELLNKILSSPELIEKLVRDYGTVSNSQGVPNARSNPAAFPHPPTTVNQVETSTTSAAFSASASYPSLSGGQVVFNPSQSLTLPAVSPVTVSSSAIGGPPAKDSNYYKSLIQQHGGERQETLPYSGNCYMQQQPVGSQETTHNYRSREQKTKIMKPCIYFNSPRGCRNGVNCAYQHDAEFRPRGSAVPGIQNSKRMKLDSEISS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3685 430 ProSiteProfiles Zinc finger C3H1-type profile. 377 405 IPR000571 GO:0046872
Sto9g3685 430 MobiDBLite consensus disorder prediction 161 196 - -
Sto9g3685 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 425 - -
Sto9g3685 430 MobiDBLite consensus disorder prediction 410 430 - -
Sto9g3685 430 MobiDBLite consensus disorder prediction 45 67 - -
Sto9g3685 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3685 Sto-Chr9 35230003 35234436 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sto9g3685 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3685 - - cam:101501814 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3685 9 35230003 35234436 Sto9g3685 9 35230003 35234436 ECH